RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 NUAK1O60285 661 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 NAE1Q13564 534 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 TCEAL8Q8IYN2 117 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ZNF540Q8NDQ6 660 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ZFP90Q8TF47 636 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 RORBQ92753 470 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 KIF17Q9P2E2 1029 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 PNMA8BQ9ULN7 279 aaPredicted RBP24.52■■□□□ 1.52
HOXB3-201ENST00000311626 AP3M1Q9Y2T2 418 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 FUOMA2VDF0 154 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ZBBXA8MT70 800 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 CYP2A7P20853 494 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 MAPK1P28482 360 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ETV3P41162 512 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 TSTA3Q13630 321 aaPredicted RBP24.52■■□□□ 1.52
HOXB3-201ENST00000311626 DOC2AQ14183 400 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 HKDC1Q2TB90 917 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.52■■□□□ 1.52
HOXB3-201ENST00000311626 KDM4DQ6B0I6 523 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 METTL2BQ6P1Q9 378 aaKnown RBP24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ANKRD13BQ86YJ7 626 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 SLC39A11Q8N1S5 342 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 RPL3LQ92901 407 aaKnown RBP24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ECHDC3Q96DC8 303 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 ZNF558Q96NG5 402 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 TM9SF3Q9HD45 589 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 TBCCD1Q9NVR7 557 aa24.52■■□□□ 1.52
HOXB3-201ENST00000311626 GBAP04062 536 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 ITGAMP11215 1152 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 JUPP14923 745 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 BDKRB1P46663 353 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 GGTA1PQ4G0N0 100 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 HTR3DQ70Z44 454 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 ZNF106Q9H2Y7 1883 aaKnown RBP24.51■■□□□ 1.51
HOXB3-201ENST00000311626 IGLV3-16A0A075B6K0 115 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 GFYI3L273 518 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 UGT2B11O75310 529 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 PBLDP30039 288 aaPredicted RBP24.51■■□□□ 1.51
HOXB3-201ENST00000311626 NCS1P62166 190 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 SERPINA11Q86U17 422 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 VPS29Q9UBQ0 182 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 NAALAD2Q9Y3Q0 740 aa24.51■■□□□ 1.51
HOXB3-201ENST00000311626 ARHGEF33A8MVX0 844 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 SULT1C4O75897 302 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 CCDC159P0C7I6 412 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 ACPPP15309 386 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 PRPS1L1P21108 318 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 ARHGDIAP52565 204 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 CYP27C1Q4G0S4 372 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 THOC6Q86W42 341 aaKnown RBP24.5■■□□□ 1.51
HOXB3-201ENST00000311626 DNAJB8Q8NHS0 232 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 SAMD11Q96NU1 681 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 SLC46A2Q9BY10 475 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 AMBNQ9NP70 447 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 KRT84Q9NSB2 600 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 ERGIC3Q9Y282 383 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 NEDD8-MDP1E9PL57 170 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 SGTAO43765 313 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 FAM20BO75063 409 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 OPN1SWP03999 348 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 ZNF12P17014 697 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 CD300CQ08708 224 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 RFX4Q33E94 735 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 ANGPTL8Q6UXH0 198 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 C1orf52Q8N6N3 182 aaKnown RBP24.5■■□□□ 1.51
HOXB3-201ENST00000311626 FBLIM1Q8WUP2 373 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 TPT1P8Q9HAU6 139 aa24.5■■□□□ 1.51
HOXB3-201ENST00000311626 VIPP01282 170 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 DNAJA1P31689 397 aaKnown RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 HNMTP50135 292 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 CRYBA2P53672 197 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 SLC35A2P78381 396 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 CREMQ03060 361 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 MTAPQ13126 283 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 HHIPQ96QV1 700 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 MCCC1Q96RQ3 725 aaPredicted RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 CHCHD3Q9NX63 227 aaKnown RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 THUMPD1Q9NXG2 353 aaKnown RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 GABRR3A8MPY1 467 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 CBFA2T3O75081 653 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 LCKP06239 509 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 ACSM2AQ08AH3 577 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 RGS21Q2M5E4 152 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 ZC3H12BQ5HYM0 836 aaKnown RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 ACSM2BQ68CK6 577 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 AHSA2Q719I0 299 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 TCAIMQ8N3R3 496 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 OR4K3Q96R72 315 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 CORO1BQ9BR76 489 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 TMEM184CQ9NVA4 438 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 HCFC1R1Q9NWW0 138 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 TRNAU1APQ9NX07 287 aaKnown RBP24.49■■□□□ 1.51
HOXB3-201ENST00000311626 FZD4Q9ULV1 537 aa24.49■■□□□ 1.51
HOXB3-201ENST00000311626 ARHGEF15O94989 841 aa24.48■■□□□ 1.51
HOXB3-201ENST00000311626 NADKO95544 446 aaPredicted RBP24.48■■□□□ 1.51
HOXB3-201ENST00000311626 IL1RNP18510 177 aa24.48■■□□□ 1.51
HOXB3-201ENST00000311626 KRT20P35900 424 aa24.48■■□□□ 1.51
HOXB3-201ENST00000311626 CTSCP53634 463 aa24.48■■□□□ 1.51
HOXB3-201ENST00000311626 DEFB103AP81534 67 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms