RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SPHK1Q9NYA1 384 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 POLR3HQ9Y535 204 aaPredicted RBP21.69■■□□□ 1.06
IRF3-201ENST00000309877 YY2O15391 372 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 GYG2O15488 501 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 PRICKLE3O43900 615 aaPredicted RBP21.69■■□□□ 1.06
IRF3-201ENST00000309877 CD1EP15812 388 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 PRPH2P23942 346 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 GRIK2Q13002 908 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 RBBP5Q15291 538 aaKnown RBP21.69■■□□□ 1.06
IRF3-201ENST00000309877 PLK5Q496M5 336 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 CACHD1Q5VU97 1274 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 GK5Q6ZS86 529 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 ADCK2Q7Z695 626 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 SFTPA2Q8IWL1 248 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 PARP9Q8IXQ6 854 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 RBM12BQ8IXT5 1001 aaKnown RBP21.69■■□□□ 1.06
IRF3-201ENST00000309877 ZNF740Q8NDX6 193 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 SLC22A18Q96BI1 424 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 BRINP2Q9C0B6 783 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 VPS29Q9UBQ0 182 aa21.69■■□□□ 1.06
IRF3-201ENST00000309877 FANCMQ8IYD8 2048 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 MAGEB17A8MXT2 336 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 HRO43593 1189 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 CMPK1P30085 196 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 PEBP1P30086 187 aaKnown RBP21.68■■□□□ 1.06
IRF3-201ENST00000309877 MRPL19P49406 292 aaKnown RBP21.68■■□□□ 1.06
IRF3-201ENST00000309877 PDCD4Q53EL6 469 aaKnown RBP21.68■■□□□ 1.06
IRF3-201ENST00000309877 CEP68Q76N32 757 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 ADGRF3Q8IZF5 1079 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 SDR16C5Q8N3Y7 309 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 ZNF548Q8NEK5 533 aaPredicted RBP21.68■■□□□ 1.06
IRF3-201ENST00000309877 OR9I1Q8NGQ6 314 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 RTKNQ9BST9 563 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 PITHD1Q9GZP4 211 aaPredicted RBP21.68■■□□□ 1.06
IRF3-201ENST00000309877 TAS2R1Q9NYW7 299 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 SUSD2Q9UGT4 822 aa21.68■■□□□ 1.06
IRF3-201ENST00000309877 CFAP73A6NFT4 308 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 NPIPB8E9PQR5 432 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 FOXE1O00358 373 aaPredicted RBP21.67■■□□□ 1.06
IRF3-201ENST00000309877 BTN3A3O00478 584 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 ANXA6P08133 673 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 SNRPB2P08579 225 aaKnown RBP21.67■■□□□ 1.06
IRF3-201ENST00000309877 G6PDP11413 515 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 HHEXQ03014 270 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 CUL3Q13618 768 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 ADNP2Q6IQ32 1131 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 CYP20A1Q6UW02 462 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 AVL9Q8NBF6 648 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 OR2L3Q8NG85 312 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 OR4K1Q8NGD4 311 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 ERVMER34-1Q9H9K5 563 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 NMRK1Q9NWW6 199 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 TMED5Q9Y3A6 229 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 GON4LQ3T8J9 2241 aa21.67■■□□□ 1.06
IRF3-201ENST00000309877 OR6C74A6NCV1 312 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 SDC3O75056 442 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 SLC22A3O75751 556 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 MAPK1P28482 360 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 PIK3CBP42338 1070 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 RPS13P62277 151 aaKnown RBP21.66■■□□□ 1.06
IRF3-201ENST00000309877 REEP5Q00765 189 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 STX5Q13190 355 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 KIR2DS3Q14952 304 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 RBM15BQ8NDT2 890 aaKnown RBP21.66■■□□□ 1.06
IRF3-201ENST00000309877 APIPQ96GX9 242 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 SLC25A23Q9BV35 468 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 ASIC5Q9NY37 505 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 ZIM2Q9NZV7 527 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 ADGRE2Q9UHX3 823 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 TSC22D4Q9Y3Q8 395 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 THADAQ6YHU6 1953 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 FAM221BA6H8Z2 402 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 LMO7DNF2Z398 122 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 PIAS2O75928 621 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 AMD1P17707 334 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 HRH2P25021 359 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 GRK3P35626 688 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 UFM1P61960 85 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 CSNK1G2P78368 415 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 KIAA0040Q15053 153 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 TMEM26Q6ZUK4 368 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 FAM20CQ8IXL6 584 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 FBXL6Q8N531 539 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 OR10G6Q8NH81 332 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 C1orf21Q9H246 121 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 NT5DC2Q9H857 520 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 DMRT3Q9NQL9 472 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 TMEM74BQ9NUR3 256 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 TMEM184CQ9NVA4 438 aa21.66■■□□□ 1.06
IRF3-201ENST00000309877 FEZF1A0PJY2 475 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 GSAPA4D1B5 854 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 ANKDD1BA6NHY2 528 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 AIM2O14862 343 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 SH3BGRLO75368 114 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 NQO1P15559 274 aaKnown RBP21.65■■□□□ 1.06
IRF3-201ENST00000309877 POLR2CP19387 275 aaPredicted RBP21.65■■□□□ 1.06
IRF3-201ENST00000309877 CTSKP43235 329 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 BIRC2Q13490 618 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 DEFB133Q30KQ1 61 aa21.65■■□□□ 1.06
IRF3-201ENST00000309877 MMEL1Q495T6 779 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms