RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 AIG1Q9NVV5 245 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 CUEDC1Q9NWM3 386 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 TAS2R1Q9NYW7 299 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 TAAR2Q9P1P5 351 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SNX6Q9UNH7 406 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 GPR45Q9Y5Y3 372 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 HEBP2Q9Y5Z4 205 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SNRNP200O75643 2136 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 SPTA1P02549 2419 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 A8MUI8 341 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 B2RBV5 119 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 C9JVG2 144 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 J3QKU1 62 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 TLR4O00206 839 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 PSMD12O00232 456 aaPredicted RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 RGS14O43566 566 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 PRICKLE3O43900 615 aaPredicted RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 HNRNPCL1O60812 293 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 CSF2P04141 144 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 C1GALT1C1LP0DN25 315 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 JUNDP17535 347 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 CPOXP36551 454 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 MRPL19P49406 292 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 RPL38P63173 70 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 EMX2Q04743 252 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 SRSF5Q13243 272 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 KRT33BQ14525 404 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 HERC3Q15034 1050 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 GSTA3Q16772 222 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 KIF19Q2TAC6 998 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 AP5B1Q2VPB7 878 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 AGKQ53H12 422 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 IYDQ6PHW0 289 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 WDR5BQ86VZ2 330 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 FAM129CQ86XR2 697 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF740Q8NDX6 193 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 OR7G3Q8NG95 312 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 CMTM5Q96DZ9 223 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 TEX37Q96LM6 180 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 MTERF1Q99551 399 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 BTBD10Q9BSF8 475 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 HAUS8Q9BT25 410 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 GSDMCQ9BYG8 508 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 BRINP2Q9C0B6 783 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 EHD1Q9H4M9 534 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 PFDN4Q9NQP4 134 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 SDR39U1Q9NRG7 319 aaPredicted RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 SPHK1Q9NYA1 384 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 CCDC167Q9P0B6 97 aa6.71□□□□□ -1.34
PTCD2-201ENST00000308077 APOBEC3BQ9UH17 382 aaKnown RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 POLR3HQ9Y535 204 aaPredicted RBP6.71□□□□□ -1.34
PTCD2-201ENST00000308077 GON4LQ3T8J9 2241 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 TMEM131Q92545 1883 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 HEATR5BQ9P2D3 2071 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 IGKV1-8A0A0C4DH67 115 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 PIPSLA2A3N6 862 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 ZNF839A8K0R7 811 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NPIPB8E9PQR5 432 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NRP2O60462 931 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 RSL1D1O76021 490 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 ETHE1O95571 254 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 KRT16P08779 473 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CTSEP14091 401 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 SLC2A4P14672 509 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 IDO1P14902 403 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NME1P15531 152 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NQO1P15559 274 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 PRPH2P23942 346 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CSNK1EP49674 416 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NXPH1P58417 271 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 DDX39BQ13838 428 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CYLC2Q14093 348 aaPredicted RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 KIAA0040Q15053 153 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 IMPG1Q17R60 797 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 IL23RQ5VWK5 629 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 TAF8Q7Z7C8 310 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 C17orf64Q86WR6 236 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 ZFAND4Q86XD8 727 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 FAM20CQ8IXL6 584 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 LAS2Q8IYD9 372 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 NAGSQ8N159 534 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 MIER2Q8N344 545 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 OR2A1Q8NGT9 310 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 HUS1BQ8NHY5 278 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 RP9Q8TA86 221 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CXorf40BQ96DE9 158 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 APIPQ96GX9 242 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 PPP3R2Q96LZ3 170 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 EFCAB11Q9BUY7 163 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 RAB11FIP5Q9BXF6 653 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 TBC1D10AQ9BXI6 508 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 CADM1Q9BY67 442 aaKnown RBP6.7□□□□□ -1.34
PTCD2-201ENST00000308077 ACTL8Q9H568 366 aa6.7□□□□□ -1.34
PTCD2-201ENST00000308077 LRTM1Q9HBL6 345 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms