RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LGALS2P05162 132 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SPATA31C1P0DKV0 1188 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 E2F1Q01094 437 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 KLF1Q13351 362 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 DLG2Q15700 870 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 GLYATQ6IB77 296 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LLGL2Q6P1M3 1020 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SAPCD2Q86UD0 394 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CUZD1Q86UP6 607 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CELF5Q8N6W0 485 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
USH2A-201ENST00000307340 CPT1BQ92523 772 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CCDC115Q96NT0 180 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SPIN2AQ99865 258 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SPIN2BQ9BPZ2 258 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF408Q9H9D4 720 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PRSS51A0A1B0GVH4 220 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TRIM43BA6NCK2 446 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CAPN8A6NHC0 703 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF99A8MXY4 864 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 PRODHO43272 600 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PCDHGA12O60330 932 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF280AP59817 542 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 SLC7A9P82251 487 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TLE3Q04726 772 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 FAM214AQ32MH5 1076 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 REEP3Q6NUK4 255 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LRRC69Q6ZNQ3 347 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TMEM156Q8N614 296 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CDC26Q8NHZ8 85 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SLC35B4Q969S0 331 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 P2RY11Q96G91 374 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 MINDY3Q9H8M7 445 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 WDR27A2RRH5 827 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 H7C2Y5 167 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SBF1O95248 1867 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PRKAR2AP13861 404 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 UGT1A1P22309 533 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 NUDT6P53370 316 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 RPS7P62081 194 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 CLCQ05315 142 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 XKR6Q5GH73 641 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF782Q6ZMW2 699 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 AMZ2Q86W34 360 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CILP2Q8IUL8 1156 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 C1orf174Q8IYL3 243 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 DCAF4L2Q8NA75 395 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 OR2T33Q8NG76 320 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 COG8Q96MW5 612 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 AMDHD1Q96NU7 426 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SLC4A9Q96Q91 983 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 KLHL21Q9UJP4 597 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 OARD1Q9Y530 152 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SNX8Q9Y5X2 465 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CSPG5O95196 566 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 DLDP09622 509 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF37AP17032 561 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 MAGEA2P43356 314 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 OTUD3Q5T2D3 398 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 ZNF704Q6ZNC4 412 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 ADCK2Q7Z695 626 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LRRC28Q86X40 367 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 CDADC1Q9BWV3 514 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 NKIRAS2Q9NYR9 191 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 DGKBQ9Y6T7 804 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PLXNB2O15031 1838 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 ZNF623O75123 536 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 RGS11O94810 467 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 FMO4P31512 558 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 RYKP34925 604 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 BMXP51813 675 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 GAD2Q05329 585 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 SERTAD2Q14140 314 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 DOC2AQ14183 400 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 RNF128Q8TEB7 428 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 SLC6A14Q9UN76 642 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 V9GYQ6 96 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 UBR3Q6ZT12 1888 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 FAM221BA6H8Z2 402 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 MMP3P08254 477 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 HMGCLP35914 325 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 DCDC1P59894 354 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 CREB5Q02930 508 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 SELPLGQ14242 412 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 AAK1Q2M2I8 961 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 FRG2Q64ET8 278 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 CLVS1Q8IUQ0 354 aaPredicted RBP3.91□□□□□ -1.78
USH2A-201ENST00000307340 ZNF781Q8N8C0 355 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 KCTD4Q8WVF5 259 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 FRG2BQ96QU4 278 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 ZNF587Q96SQ5 575 aaPredicted RBP3.91□□□□□ -1.78
USH2A-201ENST00000307340 SLC22A11Q9NSA0 550 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 GPR34Q9UPC5 381 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 GSRP00390 522 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 SLC9A3P48764 834 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 CDH11P55287 796 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 RAB40BQ12829 278 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 GTF2H2Q13888 395 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 UAP1L1Q3KQV9 507 aa3.91□□□□□ -1.78
USH2A-201ENST00000307340 FAM171A1Q5VUB5 890 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms