RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 WNT3AP56704 352 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 RASGRP3Q8IV61 690 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 CPNE9Q8IYJ1 553 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 FBXL8Q96CD0 374 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SPAM1P38567 509 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 BDH1Q02338 343 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 HNRNPA0Q13151 305 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 GALNT10Q86SR1 603 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 DENND2DQ9H6A0 471 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 EEF1E1O43324 174 aaKnown RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 SLC9A9Q8IVB4 645 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 BSCL2Q96G97 398 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-201ENST00000306085 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 COQ3Q9NZJ6 369 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
TRIM56-201ENST00000306085 PRKD1Q15139 912 aaPredicted RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PPP4R1LQ9P1A2 415 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 HMGN1P05114 100 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CD97P48960 835 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 RHDQ02161 417 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 COMMD7Q86VX2 200 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 OR10G2Q8NGC3 310 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 RNF157Q96PX1 679 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 ARL6Q9H0F7 186 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 TAS2R1Q9NYW7 299 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CDK18Q07002 472 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 FGL2Q14314 439 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 NIPAL1Q6NVV3 410 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 NCCRP1Q6ZVX7 275 aaPredicted RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 NUFIP1Q9UHK0 495 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 FER1L6Q2WGJ9 1857 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CAPN15O75808 1086 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 TARBP2Q15633 366 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PKP4Q99569 1192 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 HOXB9P17482 250 aaPredicted RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 GRIA2P42262 883 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 MAGEB1P43366 347 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 DDR1Q08345 913 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 ZC3H14Q6PJT7 736 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PCDHB1Q9Y5F3 818 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PCM1Q15154 2024 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 NUDT17P0C025 328 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 MPIP34949 423 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 WASP42768 502 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 BEX3Q00994 111 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 LCP2Q13094 533 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PPM1JQ5JR12 505 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 FAM122CQ6P4D5 195 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 VSTM1Q6UX27 236 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 ABHD13Q7L211 337 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF558Q96NG5 402 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 APODP05090 189 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 BEST3Q8N1M1 668 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 LILRB2Q8N423 598 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 RNF13O43567 381 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 CRISP3P54108 245 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 HYAL2Q12891 473 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 UNKLQ9H9P5 680 aaKnown RBP13.07□□□□□ -0.32
TRIM56-201ENST00000306085 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
TRIM56-201ENST00000306085 PRORSD1PA6NEY8 169 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF850A8MQ14 1090 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 SERPINA7P05543 415 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 SLC29A4Q7RTT9 530 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 GPR149Q86SP6 731 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 GRM6O15303 877 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 CPA6Q8N4T0 437 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 LPPQ93052 612 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
TRIM56-201ENST00000306085 COPZ2Q9P299 210 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 IL7P13232 177 aa13.06□□□□□ -0.32
TRIM56-201ENST00000306085 MAT2AP31153 395 aaKnown RBP13.06□□□□□ -0.32
TRIM56-201ENST00000306085 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.06□□□□□ -0.323e-6■■■■□ 25
TRIM56-201ENST00000306085 AQP11Q8NBQ7 271 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms