RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 DCDC5Q6ZRR9 648 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 VTCN1Q7Z7D3 282 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 FUNDC1Q8IVP5 155 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SPARTQ8N0X7 666 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 ATOH8Q96SQ7 321 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 ZNF232Q9UNY5 417 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 POFUT2Q9Y2G5 429 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 A0A096LPI6 279 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 A0A1W2PRB8 838 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
DDX54-201ENST00000306014 GUCY1B2O75343 617 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 STX11O75558 287 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SEMA3AQ14563 771 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 OR4K1Q8NGD4 311 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 COL21A1Q96P44 957 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 RHBGQ9H310 441 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 AASSQ9UDR5 926 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 CLEC4AQ9UMR7 237 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 SNX7Q9UNH6 387 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 TMED5Q9Y3A6 229 aa12.91□□□□□ -0.34
DDX54-201ENST00000306014 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 FARSBQ9NSD9 589 aaKnown RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 RHCGQ9UBD6 479 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 FGBP02675 491 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 RPS17P08708 135 aaKnown RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 BMP7P18075 431 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 ADRA1AP35348 466 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 RAB41Q5JT25 222 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 C9orf64Q5T6V5 341 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 HMBOX1Q6NT76 420 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 FAM171BQ6P995 826 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 RNF111Q6ZNA4 994 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 DNAJB7Q7Z6W7 309 aaPredicted RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 SIX5Q8N196 739 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 NXPE1Q8N323 547 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 OR52L1Q8NGH7 329 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 NFKBIDQ8NI38 313 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 NETO1Q8TDF5 533 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 MMP27Q9H306 513 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 RPS6KB2Q9UBS0 482 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 Q9Y3F1 56 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 GPR39O43194 453 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 EFCAB14O75071 495 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 DNAJB5O75953 348 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 GJA5P36382 358 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 MAGEA11P43364 429 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 RORCP51449 518 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 CLCN4P51793 760 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 AP1S2P56377 157 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 CDK6Q00534 326 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 ST3GAL4Q11206 333 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 ZNF730Q6ZMV8 503 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 ZNF557Q8N988 423 aaPredicted RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 CCDC177Q9NQR7 707 aaPredicted RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 VPS51Q9UID3 782 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 SPIN1Q9Y657 262 aaPredicted RBP12.9□□□□□ -0.34
DDX54-201ENST00000306014 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
DDX54-201ENST00000306014 TRBC2A0A5B9 178 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 SOX14O95416 240 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 PRG2P13727 222 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 MATN1P21941 496 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 ACLYP53396 1101 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 PHC1P78364 1004 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 RING1Q06587 406 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 FBXO43Q4G163 708 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 RNASE12Q5GAN4 147 aaKnown RBP12.9□□□□□ -0.35
DDX54-201ENST00000306014 FAM92BQ6ZTR7 304 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 PELI3Q8N2H9 469 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 PROKR1Q8TCW9 393 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 CD200R1Q8TD46 325 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 CXorf40AQ8TE69 158 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.35
DDX54-201ENST00000306014 CREBZFQ9NS37 354 aa12.9□□□□□ -0.35
DDX54-201ENST00000306014 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 ZNF623O75123 536 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SDC2P34741 201 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 GNA13Q14344 377 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 SLBPQ14493 270 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX54-201ENST00000306014 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
DDX54-201ENST00000306014 ANKRD13BQ86YJ7 626 aa12.89□□□□□ -0.35
DDX54-201ENST00000306014 NPAS3Q8IXF0 933 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms