RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ABCD2Q9UBJ2 740 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 TRIP11Q15643 1979 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CCRL2O00421 344 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 B4GALT5O43286 388 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 C1QTNF8P60827 252 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 E2F1Q01094 437 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CHST9Q7L1S5 443 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 WFIKKN2Q8TEU8 576 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CANT1Q8WVQ1 401 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 LCN9Q8WX39 176 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 LPPQ93052 612 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 AKT1S1Q96B36 256 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 FUZQ9BT04 418 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 GON4LQ3T8J9 2241 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 LRRC72A6NJI9 287 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 VIPP01282 170 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CYP17A1P05093 508 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CPN2P22792 545 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PRKCHP24723 683 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 DGKGP49619 791 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CTBP2P56545 445 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 OCLNQ16625 522 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CMTR2Q8IYT2 770 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PSD4Q8NDX1 1056 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PPP1R13LQ8WUF5 828 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PNPLA2Q96AD5 504 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CMTM7Q96FZ5 175 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ERVK-11Q9UQG0 969 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1B0GUL6 1792 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 EVPLQ92817 2033 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SH3PXD2BA1X283 911 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 AURKAO14965 403 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 DFNA5O60443 496 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 GDF10P55107 478 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 TSTQ16762 297 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ATAT1Q5SQI0 421 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 FRG2Q64ET8 278 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 KIAA1324Q6UXG2 1013 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 FRG2BQ96QU4 278 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 NELFAQ9H3P2 528 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 RPF2Q9H7B2 306 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 LCHNA4D1U4 455 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 A8MT66 165 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TOR1BO14657 336 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PORP16435 677 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 GSK3BP49841 420 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 KCNC4Q03721 635 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.222e-7■□□□□ 10.5
SF3B3-201ENST00000302516 C1orf216Q8TAB5 229 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 FCAMRQ8WWV6 532 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TESCQ96BS2 214 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PHB2Q99623 299 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PRRG4Q9BZD6 226 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 B3GNT4Q9C0J1 378 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 GKN3PP0CG01 181 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ENGP17813 658 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HTR2AP28223 471 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ENPP2Q13822 863 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PLA2G4EQ3MJ16 856 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 DGLUCYQ7Z3D6 616 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CFAP206Q8IYR0 622 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 YIPF7Q8N8F6 280 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 AQP11Q8NBQ7 271 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SGCDQ92629 289 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ACDQ96AP0 544 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CHIAQ9BZP6 476 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZDHHC3Q9NYG2 299 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 RDH8Q9NYR8 311 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SALL4Q9UJQ4 1053 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SLC27A5Q9Y2P5 690 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TEX13CA0A0J9YWL9 993 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 H3BSA7 217 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SOX30O94993 753 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CD48P09326 243 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CCKBRP32239 447 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PSMD8P48556 350 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PDE12Q6L8Q7 609 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CFAP52Q8N1V2 620 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF382Q96SR6 550 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CD180Q99467 661 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 FXYD6Q9H0Q3 95 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 CDK14O94921 469 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PIGRP01833 764 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 EDNRAP25101 427 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SLC25A11Q02978 314 aaKnown RBP7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF460Q14592 562 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 POF1BQ8WVV4 589 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 COQ8BQ96D53 544 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM168Q9H0V1 697 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 SIRPGQ9P1W8 387 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 A0A075B6Q4 140 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1W2PRB8 838 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 DNAJB6O75190 326 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 PDYNP01213 254 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 HSD11B1P28845 292 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 DAOAP59103 153 aa7.44□□□□□ -1.22
SF3B3-201ENST00000302516 ACTA2P62736 377 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms