RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SSX1Q16384 188 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF648Q5T619 568 aaPredicted RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 MLIPQ5VWP3 458 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 C19orf48Q6RUI8 117 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FAM20CQ8IXL6 584 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 STX19Q8N4C7 294 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ZYG11BQ9C0D3 744 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 SRRQ9GZT4 340 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 MKRN2Q9H000 416 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TIGARQ9NQ88 270 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FNIP2Q9P278 1114 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 NLRC5Q86WI3 1866 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 LAMA2P24043 3122 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PLXNA4Q9HCM2 1894 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 A0A075B6Q4 140 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FKBP9O95302 570 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 MMP3P08254 477 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 CBLP22681 906 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PRKACBP22694 351 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TACR1P25103 407 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PTPRRQ15256 657 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TIGD5Q53EQ6 642 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 MS4A13Q5J8X5 152 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PDE12Q6L8Q7 609 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GLT6D1Q7Z4J2 308 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TRIM48Q8IWZ4 208 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FLCNQ8NFG4 579 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 VANGL1Q8TAA9 524 aaPredicted RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ABCG8Q9H221 673 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ABCB8Q9NUT2 735 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 STMN3Q9NZ72 180 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FKBPLQ9UIM3 349 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 COMMD10Q9Y6G5 202 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 OTOFQ9HC10 1997 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 A0A1W2PQH9 124 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 CASTOR2A6NHX0 329 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 H3BM21 787 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GPR182O15218 404 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FFAR2O15552 330 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 COL6A1P12109 1028 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GABRB1P18505 474 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PCSK1P29120 753 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 KDELR2P33947 212 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 CRYBA2P53672 197 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 HOXC5Q00444 222 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 MAD2L1Q13257 205 aaPredicted RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 PTOV1Q86YD1 416 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ZZZ3Q8IYH5 903 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TSSK3Q96PN8 268 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GON7Q9BXV9 100 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF717Q9BY31 904 aaPredicted RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 DYRK4Q9NR20 520 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 CFAP20Q9Y6A4 193 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 B4DXG7 233 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 E5RI56 91 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CA12O43570 354 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 EPOP01588 193 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 ESR1P03372 595 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 PKLRP30613 574 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 S100A3P33764 101 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 RPS19P39019 145 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 PBX3P40426 434 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 RPS14P62263 151 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF235Q14590 738 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 VMACQ2NL98 169 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TTLL9Q3SXZ7 439 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CDONQ4KMG0 1287 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 FAM171BQ6P995 826 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CACTIN-AS1Q8N1I8 211 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 OR10T2Q8NGX3 314 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TTC9Q92623 222 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 KCNJ9Q92806 393 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 C7orf34Q96L11 122 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 BBS2Q9BXC9 721 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 OLA1Q9NTK5 396 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 RLIMQ9NVW2 624 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 ASIC5Q9NY37 505 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 TNPO3Q9Y5L0 923 aaKnown RBP10.54□□□□□ -0.72
ZNF558-201ENST00000301475 OR6C70A6NIJ9 312 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 LRATO95237 230 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 KCNK5O95279 499 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CSF2P04141 144 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 MC4RP32245 332 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 CLCN7P51798 805 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 DAB2P98082 770 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 IL10RBQ08334 325 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 MED22Q15528 200 aa10.54□□□□□ -0.72
ZNF558-201ENST00000301475 OR4F3Q6IEY1 312 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms