RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 HK2P52789 917 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 CTSCP53634 463 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 OCRLQ01968 901 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 RPA4Q13156 261 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 ACSBG2Q5FVE4 666 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 CGB2Q6NT52 195 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 METTL2BQ6P1Q9 378 aaKnown RBP20.31■□□□□ 0.84
SMCO4-201ENST00000298966 C6orf15Q6UXA7 325 aaPredicted RBP20.31■□□□□ 0.84
SMCO4-201ENST00000298966 FRA10AC1Q70Z53 315 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 LRRTM4Q86VH4 590 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 GPSM1Q86YR5 675 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 TRAPPC5Q8IUR0 188 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 CPT1CQ8TCG5 803 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 PPP4R1Q8TF05 950 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 L3HYPDHQ96EM0 354 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 PLCD4Q9BRC7 762 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 SIKE1Q9BRV8 207 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 TRIM54Q9BYV2 358 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 CUEDC1Q9NWM3 386 aaPredicted RBP20.31■□□□□ 0.84
SMCO4-201ENST00000298966 CROTQ9UKG9 612 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 PABPN1LA6NDY0 278 aaKnown RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 MGAT4DA6NG13 374 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 A8MT66 165 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 S100BP04271 92 aaPredicted RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 TROVE2P10155 538 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 EPHA4P54764 986 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 FOXM1Q08050 763 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 GALNT1Q10472 559 aaPredicted RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 BOP1Q14137 746 aaKnown RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 OR4D1Q15615 310 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 TSNQ15631 228 aaKnown RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 TTC23LQ6PF05 361 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 OR2L2Q8NH16 312 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 CNDP1Q96KN2 507 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.3■□□□□ 0.84
SMCO4-201ENST00000298966 EPB41L1Q9H4G0 881 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 OARD1Q9Y530 152 aa20.3■□□□□ 0.84
SMCO4-201ENST00000298966 SLC5A10A0PJK1 596 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 A1L4Q6 167 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 CDC14CA4D256 554 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 NPEPPSL1A6NEC2 478 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 KMOO15229 486 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 EML2O95834 649 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 FURINP09958 794 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 ZNF8P17098 575 aaPredicted RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 VCLP18206 1134 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 IMPDH1P20839 514 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 SLC1A6P48664 564 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 ALDH18A1P54886 795 aaKnown RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 ABCE1P61221 599 aaKnown RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 CDKL1Q00532 357 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 HSPA14Q0VDF9 509 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 CYHR1Q6ZMK1 362 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 SLC9B2Q86UD5 537 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 TRIM74Q86UV6 250 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 CRLF3Q8IUI8 442 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 ANKS4BQ8N8V4 417 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 FOPNLQ96NB1 174 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 GATA5Q9BWX5 397 aaPredicted RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 C1QTNF3Q9BXJ4 246 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 DRC3Q9H069 523 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 SIDT1Q9NXL6 827 aaKnown RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 KLHL14Q9P2G3 628 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 KCND3Q9UK17 655 aa20.29■□□□□ 0.84
SMCO4-201ENST00000298966 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 TNPO3Q9Y5L0 923 aaKnown RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 PRRC2CQ9Y520 2896 aaKnown RBP20.29■□□□□ 0.84
SMCO4-201ENST00000298966 HIVEP3Q5T1R4 2406 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 TNRC6AQ8NDV7 1962 aaKnown RBP20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ANKRD12Q6UB98 2062 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SUPT3HB4E1H0 165 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 CDC7O00311 574 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 EBAG9O00559 213 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SNX2O60749 519 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SUPT3HO75486 399 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 MTHFD2P13995 350 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 GFAPP14136 432 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SLC2A4P14672 509 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ZNF28P17035 718 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 AP1S2P56377 157 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 HERVK_113P63132 956 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 DMPKQ09013 629 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 RCN2Q14257 317 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ZNF658BQ4V348 819 aaPredicted RBP20.28■□□□□ 0.84
SMCO4-201ENST00000298966 CFAP157Q5JU67 520 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ZNF648Q5T619 568 aaPredicted RBP20.28■□□□□ 0.84
SMCO4-201ENST00000298966 CES4AQ5XG92 561 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SBSNQ6UWP8 590 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 PLXDC1Q8IUK5 500 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SLC22A15Q8IZD6 547 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 TCAIMQ8N3R3 496 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 GALNT6Q8NCL4 622 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 PDPRQ8NCN5 879 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 TIMM29Q9BSF4 260 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ERVK-6Q9BXR3 956 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 TWSG1Q9GZX9 223 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 EML4Q9HC35 981 aaKnown RBP20.28■□□□□ 0.84
SMCO4-201ENST00000298966 CDYLQ9Y232 598 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 ARL2BPQ9Y2Y0 163 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SPENQ96T58 3664 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms