RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MED13Q9UHV7 2174 aa5.69□□□□□ -1.5
SSX3-201ENST00000298396 NUP214P35658 2090 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 ACACBO00763 2458 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PTPRQQ9UMZ3 2332 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 IGHV5-51A0A0C4DH38 117 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FAM221AA4D161 298 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FAM149AA5PLN7 773 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FAM221BA6H8Z2 402 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 NCF1BA6NI72 391 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 NCF1CA8MVU1 366 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 G3V2L1 256 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TMPRSS2O15393 492 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 DUX1O43812 170 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TYROBPO43914 113 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 KLK8O60259 260 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PLIN3O60664 434 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 KERAO60938 352 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SPAG7O75391 227 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CPNE6O95741 557 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 GUCA1CO95843 209 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SYF2O95926 243 aaKnown RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 MT-CO3P00414 261 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 MT-ND3P03897 115 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ENO2P09104 434 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 THRAP10827 490 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 COL6A2P12110 1019 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 NCF1P14598 390 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 ST6GAL1P15907 406 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 KRT4P19013 534 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 EPORP19235 508 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CYP2A7P20853 494 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SHMT2P34897 504 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 GDF5P43026 501 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 GABRA4P48169 554 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PNLIPRP1P54315 467 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ATP6V0D1P61421 351 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TBPL1P62380 186 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 IFFO1Q0D2I5 559 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ILKQ13418 452 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 KRT33BQ14525 404 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PUM1Q14671 1186 aaKnown RBP eCLIP5.68□□□□□ -1.5
SSX3-201ENST00000298396 C16orf72Q14CZ0 275 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ACAP2Q15057 778 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PLCL1Q15111 1095 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TGFBIQ15582 683 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TAF1BQ53T94 588 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 KIAA1614Q5VZ46 1190 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CES4AQ5XG92 561 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ANKS6Q68DC2 871 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FCRL6Q6DN72 434 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TMEM71Q6P5X7 295 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 AGTRAPQ6RW13 159 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SPESP1Q6UW49 350 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SUSD1Q6UWL2 747 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FAM92BQ6ZTR7 304 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 RPS27LQ71UM5 84 aaKnown RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 ARHGAP22Q7Z5H3 698 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CCDC91Q7Z6B0 441 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ADAMTSL2Q86TH1 951 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TBC1D1Q86TI0 1168 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 EXOC3L1Q86VI1 746 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SRRM1Q8IYB3 904 aaKnown RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 KLHDC8AQ8IYD2 350 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CHCHD4Q8N4Q1 142 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 DCBLD1Q8N8Z6 715 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 AVL9Q8NBF6 648 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PDPRQ8NCN5 879 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 RCBTB1Q8NDN9 531 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 OR4D9Q8NGE8 314 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 OR2A1Q8NGT9 310 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 OR56A3Q8NH54 315 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 OR10G6Q8NH81 332 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 RHEBL1Q8TAI7 183 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 MCOLN3Q8TDD5 553 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 UBTD2Q8WUN7 234 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ADAMTS14Q8WXS8 1223 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 NCSTNQ92542 709 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 EXT2Q93063 718 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ESAMQ96AP7 390 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 RAD51AP1Q96B01 352 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SH3KBP1Q96B97 665 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PYCR2Q96C36 320 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 MOCOSQ96EN8 888 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 WDR89Q96FK6 387 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 PGM2Q96G03 612 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 PRR11Q96HE9 360 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 CCDC74BQ96LY2 380 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 CCDC138Q96M89 665 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 FOPNLQ96NB1 174 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 TGM7Q96PF1 710 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 GFM1Q96RP9 751 aaKnown RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 UBL7Q96S82 380 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 MAP3K3Q99759 626 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SH3GL2Q99962 352 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 SGPP1Q9BX95 441 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
SSX3-201ENST00000298396 PITPNM3Q9BZ71 974 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 RAB33BQ9H082 229 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 KLHL25Q9H0H3 589 aa5.68□□□□□ -1.5
SSX3-201ENST00000298396 ATG10Q9H0Y0 220 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms