RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 TFAP2CQ92754 450 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 PMEPA1Q969W9 287 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 C3orf30Q96M34 536 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 DPYSL5Q9BPU6 564 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 NPLQ9BXD5 320 aaPredicted RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 CRTAC1Q9NQ79 661 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 PCDHB1Q9Y5F3 818 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 PEX16Q9Y5Y5 336 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 HLA-DQA2P01906 255 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MT-ND2P03891 347 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ACADVLP49748 655 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 TMBIM6P55061 237 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CHIT1Q13231 466 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 PAGE3Q5JUK9 113 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CYS1Q717R9 158 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 RELTQ969Z4 430 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 DCLK1O15075 740 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 KERAO60938 352 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 PAK4O96013 591 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 NR4A2P43354 598 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 SLC15A1P46059 708 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ITGA1P56199 1179 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 BHLHB9Q6PI77 547 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ZZZ3Q8IYH5 903 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR52B6Q8NGF0 335 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 FAM124BQ9H5Z6 455 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 USP22Q9UPT9 525 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR6C70A6NIJ9 312 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 HEPACAM2A8MVW5 462 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CLDN4O14493 209 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR1F1O43749 312 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ZNF623O75123 536 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 TFPIP10646 304 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 PLA2G16P53816 162 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MANFP55145 182 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 SOX4Q06945 474 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 ATP13A5Q4VNC0 1218 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 RTP2Q5QGT7 225 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR2T5Q6IEZ7 315 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ENPP6Q6UWR7 440 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ZBTB2Q8N680 514 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR2T29Q8NH02 315 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ENOPH1Q9UHY7 261 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ADAM30Q9UKF2 790 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CFAP20Q9Y6A4 193 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 OR1I1O60431 355 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 BCAS1O75363 584 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 KLF8O95600 359 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 SMIM18P0DKX4 95 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MYF6P23409 242 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CMPK1P30085 196 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 SCN1BQ07699 218 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 CD47Q08722 323 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 RBM18Q96H35 190 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 TRNT1Q96Q11 434 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 RIOK2Q9BVS4 552 aaKnown RBP13.07□□□□□ -0.32
HPS3-201ENST00000296051 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 MIOSQ9NXC5 875 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 HS3ST4Q9Y661 456 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 SPTBN2O15020 2390 aa13.07□□□□□ -0.32
HPS3-201ENST00000296051 GABRDO14764 452 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 SSNA1O43805 119 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 GJB5O95377 273 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 FYNP06241 537 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 ANXA4P09525 319 aaPredicted RBP13.06□□□□□ -0.32
HPS3-201ENST00000296051 BMP2P12643 396 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 HOXD12P35452 270 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
HPS3-201ENST00000296051 DSC3Q14574 896 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 MLIPQ5VWP3 458 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 KHDRBS2Q5VWX1 349 aaKnown RBP13.06□□□□□ -0.32
HPS3-201ENST00000296051 ZNF544Q6NX49 715 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 MACC1Q6ZN28 852 aa13.06□□□□□ -0.32
HPS3-201ENST00000296051 CHERPQ8IWX8 916 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms