RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 MAGEA12P43365 314 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ITGA1P56199 1179 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 AP1S2P56377 157 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 PSMA6P60900 246 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CXADRP78310 365 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CYP4F2P78329 520 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ABATP80404 500 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CDKL1Q00532 357 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 RELBQ01201 579 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 NAB1Q13506 487 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 E2F2Q14209 437 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 FAM153CQ494X1 144 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 MANEAQ5SRI9 462 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 PRAMEF9Q5VWM5 478 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 C16orf46Q6P387 395 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 TLDC1Q6P9B6 456 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CYB5D1Q6P9G0 228 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 AGTRAPQ6RW13 159 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 FAM198BQ6UWH4 519 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ISCA2Q86U28 154 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 TAX1BP1Q86VP1 789 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM151AQ8N4L1 468 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 NKAPQ8N5F7 415 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 GPATCH11Q8N954 259 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 EIF1ADQ8N9N8 165 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 MCOLN3Q8TDD5 553 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CT55Q8WUE5 264 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 PTERQ96BW5 349 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 MIPEPQ99797 713 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 DPH7Q9BTV6 452 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 GPR87Q9BY21 358 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CHST8Q9H2A9 424 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CDC42EP4Q9H3Q1 356 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ACSS3Q9H6R3 686 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 IGSF5Q9NSI5 407 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ANKMY1Q9P2S6 941 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 MRPS18BQ9Y676 258 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 AP1M2Q9Y6Q5 423 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 PRRC2CQ9Y520 2896 aaKnown RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 HELZ2Q9BYK8 2649 aaKnown RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 E7EQ34 232 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ATXN7O15265 892 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 LCMT2O60294 686 aaKnown RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CPNE3O75131 537 aaKnown RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ALDOAP04075 364 aaKnown RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ITGB2P05107 769 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 MYBL2P10244 700 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 MTHFD2P13995 350 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CD1DP15813 335 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 TCN2P20062 427 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SLC26A3P40879 764 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SLC6A12P48065 614 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 RGS4P49798 205 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CSNK1G2P78368 415 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 NFKB2Q00653 900 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 PCDH1Q08174 1060 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 TBR1Q16650 682 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 DEFB110Q30KQ9 67 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CDKL4Q5MAI5 379 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 BROXQ5VW32 411 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 LCTLQ6UWM7 567 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 COX15Q7KZN9 410 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 VN1R4Q7Z5H5 301 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CENPLQ8N0S6 344 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SHISA5Q8N114 240 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 DTWD1Q8N5C7 304 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 IL22RA1Q8N6P7 574 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 PPM1NQ8N819 430 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SKA2Q8WVK7 121 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SLC44A1Q8WWI5 657 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 RHBDF1Q96CC6 855 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 TRIM44Q96DX7 344 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 C10orf90Q96M02 699 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 DPH2Q9BQC3 489 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ACAT2Q9BWD1 397 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 NLNQ9BYT8 704 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 ACTR5Q9H9F9 607 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM184CQ9NVA4 438 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 CUEDC1Q9NWM3 386 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SOHLH2Q9NX45 425 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 COPG2Q9UBF2 871 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 TAC3Q9UHF0 121 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 OARD1Q9Y530 152 aa8.76□□□□□ -1.01
HMGN1-201ENST00000288344 SPTA1P02549 2419 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 IGLV3-12A0A075B6K2 115 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 VSTM2BA6NLU5 285 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 H0YGG7 62 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 H7BY64 318 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ZSCAN9O15535 394 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PHGDHO43175 533 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 FOXS1O43638 330 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 CREG1O75629 220 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 C1QL1O75973 258 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 OR2B3O76000 313 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 TBX6O95947 436 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 EPORP19235 508 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PTPN4P29074 926 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms