RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KRT6AP02538 564 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 KRT6BP04259 564 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 UGT2B7P16662 529 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 TYRP1P17643 537 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 CMPK1P30085 196 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 KRT6CP48668 564 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 CCR8P51685 355 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 EPHA4P54764 986 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 LAPTM5Q13571 262 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 NR1D2Q14995 579 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 LSM12Q3MHD2 195 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PAGE2BQ5JRK9 111 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 FAM91A1Q658Y4 838 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 EID2Q8N6I1 236 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 OR4K1Q8NGD4 311 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 OR6C4Q8NGE1 309 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 RSC1A1Q92681 617 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 C19orf60Q96EN9 201 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PRAP1Q96NZ9 151 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 CCDC28BQ9BUN5 200 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 DNAAF2Q9NVR5 837 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 MANBAO00462 879 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PIP5K1BO14986 540 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 CCDC22O60826 627 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 AMD1P17707 334 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 HRH2P25021 359 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 GPR3P46089 330 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 SLBPQ14493 270 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 ABRAXAS2Q15018 415 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 SUZ12Q15022 739 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 NR0B2Q15466 257 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 LACTB2Q53H82 288 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 KIAA1614Q5VZ46 1190 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 METTL21CQ5VZV1 264 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 FRG2Q64ET8 278 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 RNF165Q6ZSG1 346 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 FAM20CQ8IXL6 584 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 DDIASQ8IXT1 998 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 USP7Q93009 1102 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 FRG2BQ96QU4 278 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 ELOVL6Q9H5J4 265 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PFDN4Q9NQP4 134 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 BTRCQ9Y297 605 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PCDHGB2Q9Y5G2 931 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 PCDHGA11Q9Y5H2 935 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 GPR179Q6PRD1 2367 aa18.19■□□□□ 0.5
PDLIM3-202ENST00000284770 KIAA0754O94854 1291 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 FKBP9O95302 570 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 PROS1P07225 676 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 LINC00032P0C843 101 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 MYF5P13349 255 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 CXCR2P25025 360 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 ALDH4A1P30038 563 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 CAPZBP47756 277 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 HTR6P50406 440 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 MEF2AQ02078 507 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 BNIP1Q12981 228 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 HIST2H2ACQ16777 129 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 HIST2H2AA3Q6FI13 130 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 ARMC6Q6NXE6 501 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 MED27Q6P2C8 311 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 SPESP1Q6UW49 350 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 DBX2Q6ZNG2 339 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 ACAD11Q709F0 780 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 ACTRT2Q8TDY3 377 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 C3orf30Q96M34 536 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 DPH7Q9BTV6 452 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 SPNS1Q9H2V7 528 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 SLC6A20Q9NP91 592 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 SAR1AQ9NR31 198 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 FARSBQ9NSD9 589 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 TMEM184CQ9NVA4 438 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF490Q9ULM2 529 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 PTGDR2Q9Y5Y4 395 aa18.18■□□□□ 0.5
PDLIM3-202ENST00000284770 LY6G6EA0A0G2JKS1 128 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 E9PBE3 544 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 KLHL41O60662 606 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 PNLIPP16233 465 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 NBL1P41271 181 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 CSNK1G2P78368 415 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SF3A2Q15428 464 aaKnown RBP18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SLC5A12Q1EHB4 618 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SCIMPQ6UWF3 145 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 LAS2Q8IYD9 372 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 KRT78Q8N1N4 520 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 OR7G3Q8NG95 312 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 WDR20Q8TBZ3 569 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 UBE2E3Q969T4 207 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 REPS1Q96D71 796 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 AIF1LQ9BQI0 150 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 PITHD1Q9GZP4 211 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 ARMCX1Q9P291 453 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SNX7Q9UNH6 387 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 U3KQA8 63 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 ARID1BQ8NFD5 2236 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 PDYNP01213 254 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 NEK2P51955 445 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF33BQ06732 778 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SGO1Q5FBB7 561 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms