RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ALDH3B2P48448 385 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 C6orf183Q5T699 404 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 AUTS2Q8WXX7 1259 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 P2RY11Q96G91 374 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ITPAQ9BY32 194 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 BTBD1Q9H0C5 482 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 LHX5Q9H2C1 402 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 BRF2Q9HAW0 419 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 YDJCA8MPS7 323 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 IL3P08700 152 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ELOAQ14241 798 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TARBP2Q15633 366 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TEX44Q53QW1 395 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 C9orf131Q5VYM1 1079 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF662Q6ZS27 426 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TEX19Q8NA77 164 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 LRRN4CLQ8ND94 238 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 EIF5A2Q9GZV4 153 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CDC14AQ9UNH5 594 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 EPHB6O15197 1021 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TREHO43280 583 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 BRINP1O60477 761 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RPS3P23396 243 aaKnown RBP eCLIP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RPL26P61254 145 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 HERVK_113P63132 956 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RAB31Q13636 194 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TAF1AQ15573 450 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM214Q6NUQ4 689 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 KIAA0319LQ8IZA0 1049 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TBC1D15Q8TC07 691 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ZBTB45Q96K62 511 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CMKLR1Q99788 373 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 NDUFAF4Q9P032 175 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 A8MUI8 341 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CD3GP09693 182 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RHOQP17081 205 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GNRHRP30968 328 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 FXYD6P3P58550 94 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ACTR1AP61163 376 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 HSD11B2P80365 405 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CLCA4Q14CN2 919 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM125Q96AQ2 219 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM109Q9BVC6 243 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 SLC25A51Q9H1U9 297 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 C19orf25Q9UFG5 118 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 PCDH7O60245 1069 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PRPS1L1P21108 318 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 HSPA7P48741 367 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ATXN7L3Q14CW9 347 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF773Q6PK81 442 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 MBOAT1Q6ZNC8 495 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 C2orf73Q8N5S3 287 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 MALSU1Q96EH3 234 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CD180Q99467 661 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ASB6Q9NWX5 421 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ERVK-19Q9WJR5 959 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 USP20Q9Y2K6 914 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PCDHB14Q9Y5E9 798 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 LILRB5O75023 590 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 GP1BBP13224 206 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CSNK2A2P19784 350 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 S1PR1P21453 382 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CORO1AP31146 461 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CLRN1P58418 232 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 AADACL2Q6P093 401 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC36A4Q6YBV0 504 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PHTF2Q8N3S3 785 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 POGLUT1Q8NBL1 392 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 A0A1W2PQH9 124 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ANKRD33BA6NCL7 494 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 NDUFS1P28331 727 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CDK3Q00526 305 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CNTN2Q02246 1040 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 AMZ1Q400G9 498 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 C9orf57Q5W0N0 161 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TATDN1Q6P1N9 297 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 GID4Q8IVV7 300 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ZFPM1Q8IX07 1006 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 OR7G2Q8NG99 324 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SHC3Q92529 594 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ARMC5Q96C12 935 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ACTR6Q9GZN1 396 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM185BQ9H7F4 350 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 USP29Q9HBJ7 922 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 NUFIP1Q9UHK0 495 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 LGALS13Q9UHV8 139 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 DIP2AQ14689 1571 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ASTN1O14525 1302 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PDLIM1O00151 329 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC34A2O95436 690 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms