RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZNF304Q9HCX3 659 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 EIF2B3Q9NR50 452 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 GNPTGQ9UJJ9 305 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 C3orf18Q9UK00 162 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 NXT1Q9UKK6 140 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 SLC39A10Q9ULF5 831 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 RUVBL1Q9Y265 456 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 MYO7BQ6PIF6 2116 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 POLQO75417 2590 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TACC2O95359 2948 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 LOC102723996A0A087X1L8 192 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 IDSB3KWA1 339 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 MYO1CO00159 1063 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PCDH17O14917 1159 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 SRPX2O60687 465 aaPredicted RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 PSIP1O75475 530 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 JRKO75564 520 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 FKBP9O95302 570 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 STATHP02808 62 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 RPN2P04844 631 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 EIF2S1P05198 315 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 ITGAMP11215 1152 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 ACPPP15309 386 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 MGAT1P26572 445 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 FMO4P31512 558 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 SLC26A3P40879 764 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 KCNJ1P48048 391 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 TTPAP49638 278 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 CLCN7P51798 805 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 EIF3BP55884 814 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 MAT1AQ00266 395 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 CDSNQ15517 529 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 FAAH2Q6GMR7 532 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PTRHD1Q6GMV3 140 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 PRMT9Q6P2P2 845 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 CENPUQ71F23 418 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 SRRM1Q8IYB3 904 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 SYCE1Q8N0S2 351 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 VWA5B2Q8N398 1253 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PPHLN1Q8NEY8 458 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 OR1N1Q8NGS0 311 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 ITLN2Q8WWU7 325 aaPredicted RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 LMF1Q96S06 567 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PKP4Q99569 1192 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 NPAS2Q99743 824 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 ZFYVE21Q9BQ24 234 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 RAB11FIP5Q9BXF6 653 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 INTS7Q9NVH2 962 aaKnown RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 SPATA7Q9P0W8 599 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PAK5Q9P286 719 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PTGFRNQ9P2B2 879 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 ZNF282Q9UDV7 671 aaPredicted RBP8.5□□□□□ -1.05
TPM3-201ENST00000271850 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 ZNF148Q9UQR1 794 aa8.5□□□□□ -1.05
TPM3-201ENST00000271850 PCNX1Q96RV3 2341 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ZNF469Q96JG9 3925 aaPredicted RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 PKDREJQ9NTG1 2253 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ARHGAP10A1A4S6 786 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 OR2W5A6NFC9 320 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 E7EVH7 732 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 MAP2K7O14733 419 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 MSTNO14793 375 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 HAT1O14929 419 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 KDM1AO60341 852 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 KLHL41O60662 606 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 AVILO75366 819 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 VAPBO95292 243 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 WDPCPO95876 746 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 PIM1P11309 404 aaPredicted RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 FBLP22087 321 aaKnown RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 ATP5DP30049 168 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 ST13P50502 369 aaKnown RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 TIAL1Q01085 375 aaKnown RBP eCLIP8.49□□□□□ -1.05
TPM3-201ENST00000271850 PMP22Q01453 160 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 KIF5AQ12840 1032 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 TMED2Q15363 201 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 KLHL38Q2WGJ6 581 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 FAM214AQ32MH5 1076 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 AARS2Q5JTZ9 985 aaKnown RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 MEI1Q5TIA1 1274 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ANKRD22Q5VYY1 191 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ZNF549Q6P9A3 640 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 DRICH1Q6PGQ1 229 aaPredicted RBP8.49□□□□□ -1.05
TPM3-201ENST00000271850 TMEM205Q6UW68 189 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 CYHR1Q6ZMK1 362 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 LANCL3Q6ZV70 420 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 NDUFAF7Q7L592 441 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 OTOAQ7RTW8 1153 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 VN1R4Q7Z5H5 301 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 PLD3Q8IV08 490 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 CSNK1A1LQ8N752 337 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 OR9A1PQ8NGU1 263 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 ZNF480Q8WV37 535 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 NR4A3Q92570 626 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 HAS2Q92819 552 aa8.49□□□□□ -1.05
TPM3-201ENST00000271850 RELTQ969Z4 430 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms