RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 COL4A4P53420 1690 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 TRBV5-3A0A0A0MS03 114 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 GNG14A0A1W2PPG7 69 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 TRIM64BA6NI03 449 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 EFCAB9A8MZ26 197 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 J3KTA2 159 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 AOC2O75106 756 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ERN1O75460 977 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 KCNK5O95279 499 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ETHE1O95571 254 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 IGHA2P01877 340 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 RETP07949 1114 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ITIH1P19827 911 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 POU1F1P28069 291 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 KDELR2P33947 212 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 RCVRNP35243 200 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 CRATP43155 626 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 PPP3CCP48454 512 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 NRIP1P48552 1158 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 TPTEP56180 551 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 MEF2AQ02078 507 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 GANABQ14697 944 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 GPNMBQ14956 572 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 UGT8Q16880 541 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ATG9BQ674R7 924 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 ZNF852Q6ZMS4 543 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SLC44A2Q8IWA5 706 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 RAVER1Q8IY67 606 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 AADATQ8N5Z0 425 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 FAM83FQ8NEG4 500 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 MCFD2Q8NI22 146 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 USP7Q93009 1102 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 REEP1Q9H902 201 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ZNF334Q9HCZ1 680 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 ACOT13Q9NPJ3 140 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 RAD18Q9NS91 495 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 GIN1Q9NXP7 522 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 GPR83Q9NYM4 423 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 TPRKBQ9Y3C4 175 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 YIPF1Q9Y548 306 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SZT2Q5T011 3432 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SPEGQ15772 3267 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 MAGEB17A8MXT2 336 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 FAM220BPB1ANY3 271 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 E7EQ34 232 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 H7C4K7 107 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 EPN2O95208 641 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 DLGAP3O95886 979 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 CHRM5P08912 532 aaPredicted RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 CD22P20273 847 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 TUFMP49411 452 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 SLC35A2P78381 396 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SREBF2Q12772 1141 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 LMAN2Q12907 356 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 DGUOKQ16854 277 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 VMACQ2NL98 169 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 TTLL9Q3SXZ7 439 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 C5orf22Q49AR2 442 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 FRG2Q64ET8 278 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.84□□□□□ -0.99
MSH4-201ENST00000263187 P3H2Q8IVL5 708 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 CHST14Q8NCH0 376 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SORCS1Q8WY21 1168 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 GTPBP3Q969Y2 492 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 SAMD11Q96NU1 681 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 FRG2BQ96QU4 278 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 NTMT1Q9BV86 223 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 IL1RAPQ9NPH3 570 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 AKIP1Q9NQ31 210 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 ABCB8Q9NUT2 735 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 USE1Q9NZ43 259 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 CFAP97Q9P2B7 532 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 DNMT3BQ9UBC3 853 aaKnown RBP8.84□□□□□ -0.99
MSH4-201ENST00000263187 FZD4Q9ULV1 537 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SNX6Q9UNH7 406 aa8.84□□□□□ -0.99
MSH4-201ENST00000263187 SOBPA7XYQ1 873 aa8.83□□□□□ -1
MSH4-201ENST00000263187 FAM227AF5H4B4 570 aa8.83□□□□□ -1
MSH4-201ENST00000263187 PCDH7O60245 1069 aa8.83□□□□□ -1
MSH4-201ENST00000263187 GADD45AP24522 165 aa8.83□□□□□ -1
MSH4-201ENST00000263187 AOAHP28039 575 aa8.83□□□□□ -1
MSH4-201ENST00000263187 MRPL19P49406 292 aaKnown RBP8.83□□□□□ -1
MSH4-201ENST00000263187 GSTM4Q03013 218 aa8.83□□□□□ -1
MSH4-201ENST00000263187 PTSQ03393 145 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ABHD18Q0P651 414 aa8.83□□□□□ -1
MSH4-201ENST00000263187 NAE1Q13564 534 aa8.83□□□□□ -1
MSH4-201ENST00000263187 MAD2L1BPQ15013 274 aaPredicted RBP8.83□□□□□ -1
MSH4-201ENST00000263187 OXA1LQ15070 435 aa8.83□□□□□ -1
MSH4-201ENST00000263187 KLHL17Q6TDP4 642 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CALHM3Q86XJ0 350 aa8.83□□□□□ -1
MSH4-201ENST00000263187 PTOV1Q86YD1 416 aa8.83□□□□□ -1
MSH4-201ENST00000263187 NAGSQ8N159 534 aa8.83□□□□□ -1
MSH4-201ENST00000263187 PLD4Q96BZ4 506 aa8.83□□□□□ -1
MSH4-201ENST00000263187 FEVQ99581 238 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CHCHD6Q9BRQ6 235 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TPT1P8Q9HAU6 139 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TRPS1Q9UHF7 1281 aa8.83□□□□□ -1
MSH4-201ENST00000263187 POU2F3Q9UKI9 436 aa8.83□□□□□ -1
MSH4-201ENST00000263187 OGDHLQ9ULD0 1010 aa8.83□□□□□ -1
MSH4-201ENST00000263187 SAMD4AQ9UPU9 718 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms