RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CASP2P42575 452 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PKNOX1P55347 436 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OCRLQ01968 901 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 MEF2AQ02078 507 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ILKQ13418 452 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 SNAP47Q5SQN1 464 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 FCRL6Q6DN72 434 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 RGS9BPQ6ZS82 235 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 ADCK2Q7Z695 626 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 MILR1Q7Z6M3 343 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PAQR7Q86WK9 346 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 FAM129CQ86XR2 697 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 MYLK4Q86YV6 388 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OR4K1Q8NGD4 311 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 OR4D9Q8NGE8 314 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PTCD3Q96EY7 689 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 TRAPPC9Q96Q05 1148 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 SEMA6CQ9H3T2 930 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 EHD1Q9H4M9 534 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 PELI2Q9HAT8 420 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 SLCO1B3Q9NPD5 702 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 TMEM184CQ9NVA4 438 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 THAP1Q9NVV9 213 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 GEMIN8Q9NWZ8 242 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 STK38LQ9Y2H1 464 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 KLK4Q9Y5K2 254 aa15.19■□□□□ 0.02
CCDC90B-201ENST00000260054 CEP250Q9BV73 2442 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 HEATR5BQ9P2D3 2071 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 KCNE1BA0A087WTH5 132 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 OR2A25A4D2G3 310 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 SLC9B1P1A6NJY1 282 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 SLC30A4O14863 429 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 UGDHO60701 494 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 RASSF9O75901 435 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 CLDN9O95484 217 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 CCR8P51685 355 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 FOXA1P55317 472 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 SPIDRQ14159 915 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 SLBPQ14493 270 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 TBCCQ15814 346 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 CLPPQ16740 277 aaPredicted RBP15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 CACHD1Q5VU97 1274 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 FIGLAQ6QHK4 219 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 PLD3Q8IV08 490 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 L3MBTL4Q8NA19 623 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF740Q8NDX6 193 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 KCNA7Q96RP8 456 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 CCDC134Q9H6E4 229 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 EML4Q9HC35 981 aaKnown RBP15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 PDP2Q9P2J9 529 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 SNX7Q9UNH6 387 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 PCDHGA1Q9Y5H4 931 aa15.18■□□□□ 0.02
CCDC90B-201ENST00000260054 IGHV5-10-1A0A0J9YXX1 117 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 HAT1O14929 419 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 THRAP10827 490 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 HRH2P25021 359 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 PDX1P52945 283 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 REEP5Q00765 189 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 LIPJQ5W064 366 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 GRHL2Q6ISB3 625 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 PRSS42Q7Z5A4 293 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 SLCO6A1Q86UG4 719 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 SLITRK4Q8IW52 837 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF781Q8N8C0 355 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 CDYL2Q8N8U2 506 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 C19orf47Q8N9M1 422 aaKnown RBP15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 AGR3Q8TD06 166 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 ZUFSPQ96AP4 578 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 DPYSL5Q9BPU6 564 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 EFCAB11Q9BUY7 163 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 SEMA5BQ9P283 1151 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 ZDHHC2Q9UIJ5 367 aa15.17■□□□□ 0.02
CCDC90B-201ENST00000260054 FEZF1A0PJY2 475 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 A8MU76 341 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 TMEM233B4DJY2 109 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 GIPC1O14908 333 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CTSVO60911 334 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 JUPP14923 745 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 E2F1Q01094 437 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 INSM1Q01101 510 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CPSF6Q16630 551 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 GGTA1PQ4G0N0 100 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 SH2D4BQ5SQS7 431 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CLEC6AQ6EIG7 209 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 FAM47EQ6ZV65 393 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 B3GNT8Q7Z7M8 397 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CARFQ8N187 725 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 WDR48Q8TAF3 677 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CCDC74BQ96LY2 380 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 FCRL4Q96PJ5 515 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 AIF1LQ9BQI0 150 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 SYNPO2LQ9H987 977 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 FAM60AQ9NP50 221 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ANKMY1Q9P2S6 941 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 TRPS1Q9UHF7 1281 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms