RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZDHHC17Q8IUH5 632 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXO36Q8NEA4 188 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 AUTS2Q8WXX7 1259 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ELF4Q99607 663 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GORASP2Q9H8Y8 452 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GAR1Q9NY12 217 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PPP1R3CQ9UQK1 317 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 A0A087X0T9 212 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 UBA6A0AVT1 1052 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MROH6A6NGR9 719 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FLRT2O43155 660 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 RNF13O43567 381 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MMP20O60882 483 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 BEST1O76090 585 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC34A2O95436 690 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ETS1P14921 441 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 COMTP21964 271 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CAP2P40123 477 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TROAPQ12815 778 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 LMAN2Q12907 356 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GPR17Q13304 367 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GRM7Q14831 915 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NAT8LQ8N9F0 302 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 REPS2Q8NFH8 660 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 BPIFCQ8NFQ6 507 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 LGALS12Q96DT0 336 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM163AQ96GL9 167 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PARK7Q99497 189 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NUDT9Q9BW91 350 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM49AQ9H0Q0 323 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PARD6AQ9NPB6 346 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 XPNPEP3Q9NQH7 507 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ANKEF1Q9NU02 776 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM161AQ9NX61 479 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CMAHPQ9Y471 501 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM205CA6NFA0 338 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TRABD2BA6NFA1 517 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 OGTO15294 1046 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TLR5O60602 858 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 RPLP2P05387 115 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FGF7P21781 194 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CREB5Q02930 508 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PMPCAQ10713 525 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC1A5Q15758 541 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 KYAT1Q16773 422 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 INAVAQ3KP66 663 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CBWD6Q4V339 395 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CBWD3Q5JTY5 395 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CBWD5Q5RIA9 395 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SH3PXD2AQ5TCZ1 1133 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CHSY1Q86X52 802 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF615Q8N8J6 731 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF641Q96N77 438 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NT5C1BQ96P26 610 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NPAS2Q99743 824 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ANKRD60Q9BZ19 345 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ALX4Q9H161 411 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NLGN3Q9NZ94 848 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NAGPAQ9UK23 515 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHA3Q9Y5H8 950 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 A0A087WZY1 265 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PQLC2LA1A4F0 135 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SPDYE2BA6NHP3 402 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GJE1A6NN92 205 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 K7ERU9 68 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 RFXAPO00287 272 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CASKO14936 926 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MAGEB4O15481 346 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 BUD23O43709 281 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GRIN3BO60391 1043 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TXNDC12O95881 172 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CHRNGP07510 517 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SPDYE6P0CI01 402 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CAPN3P20807 821 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SPRP35270 261 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 GCLMP48507 274 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 KLK7P49862 253 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 RIDAP52758 137 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SEC13P55735 322 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SNRPEP62304 92 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SPP2Q13103 211 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ARL6IP1Q15041 203 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CES4AQ5XG92 561 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MTFR2Q6P444 385 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 OTOP1Q7RTM1 612 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 RABEPKQ7Z6M1 372 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 CD300LFQ8TDQ1 290 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF606Q8WXB4 792 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 COPS5Q92905 334 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 TSPAN17Q96FV3 270 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 FEM1AQ9BSK4 669 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms