RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 H1F0P07305 194 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 XKP51811 444 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 CDK6Q00534 326 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 NFATC2Q13469 925 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 PUS10Q3MIT2 529 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 ATG14Q6ZNE5 492 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 KCTD8Q6ZWB6 473 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 DAPL1A0PJW8 107 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 CPED1A4D0V7 1026 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 EI24O14681 340 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 RLN1P04808 185 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 LEPRP48357 1165 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 PCLAFQ15004 111 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 TRAM1L1Q8N609 369 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 HAVCR1Q96D42 359 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 CLCC1Q96S66 551 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 GPR62Q9BZJ7 368 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 NSUN3Q9H649 340 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 KCNK6Q9Y257 313 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF99A8MXY4 864 aaPredicted RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 CXCR1P25024 350 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 SHMT2P34897 504 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 SCN1BQ07699 218 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 ENPP2Q13822 863 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 LYARQ9NX58 379 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 ACTR3BQ9P1U1 418 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 PSIP1O75475 530 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 BLMHQ13867 455 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 OR2T5Q6IEZ7 315 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 KBTBD6Q86V97 674 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 OR2T29Q8NH02 315 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 NAT14Q8WUY8 206 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 CAPSLQ8WWF8 208 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 IQCMA0A1B0GVH7 501 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 GJB5O95377 273 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 CYB5AP00167 134 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 MPC1LP0DKB6 136 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 GNALP38405 381 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 ALKBH2Q6NS38 261 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 CAND1Q86VP6 1230 aaKnown RBP18.43■□□□□ 0.54
PTPRE-201ENST00000254667 CHCHD4Q8N4Q1 142 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 TSPEARQ8WU66 669 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 UBAP1Q9NZ09 502 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 KLHL33A6NCF5 533 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 TMEM233B4DJY2 109 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 HRH2P25021 359 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 CAMK1Q14012 370 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 EIF4HQ15056 248 aaKnown RBP18.43■□□□□ 0.54
PTPRE-201ENST00000254667 NPAS3Q8IXF0 933 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 OR4E2Q8NGC2 313 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 PRSS51A0A1B0GVH4 220 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF840PA6NDX5 716 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 GSK3BP49841 420 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 CASP9P55211 416 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 GANABQ14697 944 aaKnown RBP18.43■□□□□ 0.54
PTPRE-201ENST00000254667 ZBTB46Q86UZ6 589 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF317Q96PQ6 595 aaPredicted RBP18.43■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF382Q96SR6 550 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 SMG9Q9H0W8 520 aaKnown RBP18.43■□□□□ 0.54
PTPRE-201ENST00000254667 TRBC2A0A5B9 178 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 TSPAN6O43657 245 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 RCBTB2O95199 551 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 NR2C1P13056 603 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 SUOXP51687 545 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 DGKQP52824 942 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 OLIG2Q13516 323 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 PAMR1Q6UXH9 720 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 Q6ZVL8 140 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 PIK3R3Q92569 461 aa18.43■□□□□ 0.54
PTPRE-201ENST00000254667 RPL10P27635 214 aaKnown RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 LMAN2Q12907 356 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 GPR68Q15743 365 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 KLHDC7BQ96G42 594 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 C14orf105Q9NVL8 296 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TMEM98Q9Y2Y6 226 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 CFAP20Q9Y6A4 193 aaKnown RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 MATN2O00339 956 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 LEFTY1O75610 366 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 PRKD3O94806 890 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 OAZ2O95190 189 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TACSTD2P09758 323 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF3P17036 446 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ARHGDIBP52566 201 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RPS21P63220 83 aaKnown RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TNFAIP8L3Q5GJ75 292 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 KCT2Q8NC54 265 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 OR10T2Q8NGX3 314 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ABCB9Q9NP78 766 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ANXA2P2A6NMY6 339 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ANXA2P07355 339 aaKnown RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 HLA-EP13747 358 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 UFM1P61960 85 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RASGEF1BQ0VAM2 473 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 GRM2Q14416 872 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 SLC2A7Q6PXP3 512 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms