RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LHX3Q9UBR4 397 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF282Q9UDV7 671 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KLQ9UEF7 1012 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 INTS6Q9UL03 887 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RABL2BQ9UNT1 228 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MGAT4DA6NG13 374 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MANSC4A6NHS7 340 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PLOD2O00469 737 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SGTAO43765 313 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CAPN1P07384 714 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CKBP12277 381 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HSD3B1P14060 373 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 BDNFP23560 247 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HSD3B2P26439 372 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CD52P31358 61 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GNA13Q14344 377 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PGS1Q32NB8 556 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ARMC12Q5T9G4 340 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MEDAGQ5VYS4 303 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RETSATQ6NUM9 610 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SBSNQ6UWP8 590 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF767PQ75MW2 155 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GPR149Q86SP6 731 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ITIH5Q86UX2 942 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OR9I1Q8NGQ6 314 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OVCA2Q8WZ82 227 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OTULINQ96BN8 352 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TRMT2BQ96GJ1 504 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF486Q96H40 463 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 AHCYL2Q96HN2 611 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CDKN2AIPNLQ96HQ2 116 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PSKH2Q96QS6 385 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GPR21Q99679 349 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SPATA5L1Q9BVQ7 753 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MARCH7Q9H992 704 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NEK6Q9HC98 313 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PTTG3PQ9NZH4 202 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SPASTQ9UBP0 616 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 EDARQ9UNE0 448 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RUVBL1Q9Y265 456 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PCDHB11Q9Y5F2 797 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SLC12A8A0AV02 714 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MTMR11A4FU01 709 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NPEPPSL1A6NEC2 478 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 AGRPO00253 132 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MAGEB3O15480 346 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HOXA2O43364 376 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OR4F21O95013 312 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SERPINA1P01009 418 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NCK1P16333 377 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ERP29P30040 261 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CAPZA2P47755 286 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CRYBA2P53672 197 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CDH4P55283 916 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 AP1S1P61966 158 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ACSM2AQ08AH3 577 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 GPR17Q13304 367 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NDUFA9Q16795 377 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 RFTN2Q52LD8 501 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 LCN1P1Q5VSP4 162 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ACSM2BQ68CK6 577 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PLET1Q6UQ28 207 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF783Q6ZMS7 281 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CALHM3Q86XJ0 350 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SPATA6LQ8N4H0 392 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 OR10A6Q8NH74 314 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SUN5Q8TC36 379 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CMTM7Q96FZ5 175 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 QRFPRQ96P65 431 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SLC30A2Q9BRI3 323 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CLEC4MQ9H2X3 399 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 IPPKQ9H8X2 491 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 C3orf14Q9HBI5 128 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MARCH2Q9P0N8 246 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 LSM7Q9UK45 103 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 PCTPQ9UKL6 214 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KLHL20Q9Y2M5 609 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TIMM13Q9Y5L4 95 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 TCF20Q9UGU0 1960 aaKnown RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MYOCOSA0A1B0GUC4 107 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 HAT1O14929 419 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 JRKO75564 520 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 STK16O75716 305 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KLHL18O94889 574 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 NR2F6P10588 404 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CTPS1P17812 591 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CCND3P30281 292 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 MAPK10P53779 464 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 UFM1P61960 85 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ARF5P84085 180 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CD47Q08722 323 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 CDK5R2Q13319 367 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 SP140Q13342 867 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 KCNC3Q14003 757 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 IFI44LQ53G44 452 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF517Q6ZMY9 492 aaPredicted RBP4.03□□□□□ -1.76
UBE4A-201ENST00000252108 Q6ZSR9 355 aa4.03□□□□□ -1.76
UBE4A-201ENST00000252108 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms