RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CD22P20273 847 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 FMO3P31513 532 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 WNT3P56703 355 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 RELAQ04206 551 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 EMX1Q04741 257 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-202ENST00000244303 SP140Q13342 867 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 LRRC26Q2I0M4 334 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 VMACQ2NL98 169 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 VTCN1Q7Z7D3 282 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 ZZZ3Q8IYH5 903 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 CENPSQ8N2Z9 138 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 CDC26Q8NHZ8 85 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 MCOLN3Q8TDD5 553 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 ZNF566Q969W8 418 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-202ENST00000244303 FAM8A1Q9UBU6 413 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 ERVK-11Q9UQG0 969 aa13.94□□□□□ -0.18
HIF3A-202ENST00000244303 PLXNA2O75051 1894 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SERTM1A2A2V5 107 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 FUOMA2VDF0 154 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ZNF99A8MXY4 864 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 LEFTY2O00292 366 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 MAN1A2O60476 641 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 NDUFS2O75306 463 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 UGT2B11O75310 529 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ACPPP15309 386 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 PRPS1L1P21108 318 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 FSHRP23945 695 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 TRPC1P48995 793 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CLK3P49761 638 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 HNRNPFP52597 415 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 VLDLRP98155 873 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 NR1D2Q14995 579 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SF1Q15637 639 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 LDLRAP1Q5SW96 308 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ZNF621Q6ZSS3 439 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CLECL1Q8IZS7 167 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ELMOD1Q8N336 334 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CHST14Q8NCH0 376 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 FAR1Q8WVX9 515 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 TRUB1Q8WWH5 349 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ELMO1Q92556 727 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 TBC1D20Q96BZ9 403 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 FCRL1Q96LA6 429 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SLC46A2Q9BY10 475 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CPEB1Q9BZB8 566 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 TM9SF3Q9HD45 589 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SLCO3A1Q9UIG8 710 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SLC16A5O15375 505 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SCN2BO60939 215 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 EFCAB14O75071 495 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 EPN2O95208 641 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CPSF4O95639 269 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 CXCL14O95715 111 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SEMG1P04279 462 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 FABP3P05413 133 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 C8AP07357 584 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 COX7A2P14406 83 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 AP1S2P56377 157 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 PHEXP78562 749 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 IRF8Q02556 426 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 DDX39BQ13838 428 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ZDHHC20Q5W0Z9 365 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 KDM4DQ6B0I6 523 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 LAIR1Q6GTX8 287 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 Q6ZVU0 165 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 B3GNT8Q7Z7M8 397 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 PTOV1Q86YD1 416 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 ANKRD13BQ86YJ7 626 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SETD9Q8NE22 299 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 SCAMP4Q969E2 229 aa13.93□□□□□ -0.18
HIF3A-202ENST00000244303 MTERF1Q99551 399 aaKnown RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 DPH2Q9BQC3 489 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-202ENST00000244303 MAGEB17A8MXT2 336 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 CFAP99D6REC4 459 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 DNAJB5O75953 348 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 GPX2P18283 190 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 KDELR2P33947 212 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 SRSF11Q05519 484 aaKnown RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 CTF1Q16619 201 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 XKR6Q5GH73 641 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 CAPN13Q6MZZ7 669 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 PGBD3Q8N328 593 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 ZNF641Q96N77 438 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 MYOCQ99972 504 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 CORO1BQ9BR76 489 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 PDP1Q9P0J1 537 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-202ENST00000244303 ERVK-18Q9QC07 812 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 SLC25A13Q9UJS0 675 aa13.92□□□□□ -0.18
HIF3A-202ENST00000244303 RPS6KA6Q9UK32 745 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms