RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SSX4O60224 188 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 TLR5O60602 858 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 TRIM3O75382 744 aaPredicted RBP9.01□□□□□ -0.97
SRSF6-201ENST00000244020 DHFRP00374 187 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 ODC1P11926 461 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 BMP1P13497 986 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 MC4RP32245 332 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 GDF5P43026 501 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 MAGEA2P43356 314 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 HTR3AP46098 478 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 ITGA1P56199 1179 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 TIAL1Q01085 375 aaKnown RBP eCLIP9.01□□□□□ -0.971e-23■□□□□ 9.4
SRSF6-201ENST00000244020 FAPQ12884 760 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 CAMK2GQ13555 558 aaPredicted RBP9.01□□□□□ -0.97
SRSF6-201ENST00000244020 CDK10Q15131 360 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 CPSF6Q16630 551 aaKnown RBP eCLIP9.01□□□□□ -0.971e-6■■□□□ 14.4
SRSF6-201ENST00000244020 ATG9BQ674R7 924 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 CHMP1BQ7LBR1 199 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 VTCN1Q7Z7D3 282 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 THEM5Q8N1Q8 247 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 LPCAT1Q8NF37 534 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 ZNF671Q8TAW3 534 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 TMEM45AQ9NWC5 275 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 THUMPD1Q9NXG2 353 aaKnown RBP9.01□□□□□ -0.97
SRSF6-201ENST00000244020 SLC25A37Q9NYZ2 338 aa9.01□□□□□ -0.97
SRSF6-201ENST00000244020 EIF3KQ9UBQ5 218 aaKnown RBP9.01□□□□□ -0.97
SRSF6-201ENST00000244020 PCNTO95613 3336 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CTDSP2O14595 271 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
SRSF6-201ENST00000244020 GPR32O75388 356 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 ERN1O75460 977 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 USP2O75604 605 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 CCNDBP1O95273 360 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 ATXN1LP0C7T5 689 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 HOXB6P17509 224 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 TTPAP49638 278 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 DNAJB7Q7Z6W7 309 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 GPR150Q8NGU9 434 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 OR6F1Q8NGZ6 308 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 TMEM40Q8WWA1 233 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 LPPQ93052 612 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 NSUN3Q9H649 340 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 SPASTQ9UBP0 616 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 TMCC3Q9ULS5 477 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PRAMEF33A0A0G2JMD5 474 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 A0A1W2PQH9 124 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 ADM5C9JUS6 153 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PCDHGA12O60330 932 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PRAMEF10O60809 474 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 STSP08842 583 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 RHOQP17081 205 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 AQP1P29972 269 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 TIE1P35590 1138 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 UGT2B10P36537 528 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PBX3P40426 434 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 HTR2BP41595 481 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 SUOXP51687 545 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 FAM214AQ32MH5 1076 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CCDC157Q569K6 752 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 DALRD3Q5D0E6 543 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 PRSS36Q5K4E3 855 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 Q6ZPB1 254 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 CADM2Q8N3J6 435 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 DNASE1L2Q92874 299 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CDADC1Q9BWV3 514 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 TANC1Q9C0D5 1861 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 HHLA1C9JL84 531 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 AP3D1O14617 1153 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PLD2O14939 933 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 KIAA0513O60268 411 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PPM1BO75688 479 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 ALX3O95076 343 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 MMP2P08253 660 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 SMIM10L2AP0DMW4 78 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 SMIM10L2BP0DMW5 78 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CA5AP35218 305 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 HK3P52790 923 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 AP2S1P53680 142 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 SNRPD2P62316 118 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 ARHGEF7Q14155 803 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 GBX1Q14549 363 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 STK11Q15831 433 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 LRRC26Q2I0M4 334 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 OLFML2AQ68BL7 652 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PDE12Q6L8Q7 609 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 TIGD4Q8IY51 512 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 POP5Q969H6 163 aaKnown RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 CLIP3Q96DZ5 547 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PANX1Q96RD7 426 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CNPPD1Q9BV87 410 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 PLSCR3Q9NRY6 295 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 ABI2Q9NYB9 513 aaPredicted RBP9□□□□□ -0.97
SRSF6-201ENST00000244020 GPR83Q9NYM4 423 aa9□□□□□ -0.97
SRSF6-201ENST00000244020 NUDT4Q9NZJ9 180 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms