RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 BEND7Q8N7W2 519 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 RERGQ96A58 199 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 COG8Q96MW5 612 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 KLHL33A6NCF5 533 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 BEST1O76090 585 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 MSL3P1P0C860 447 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 GM2AP17900 193 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FECHP22830 423 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PTPN6P29350 595 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SDR16C5Q8N3Y7 309 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 DEFB119Q8N690 84 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 EXO5Q9H790 373 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SMURF1Q9HCE7 757 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 MYH3P11055 1940 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 RIIAD1A6NNX1 92 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PSMA6P60900 246 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 HERVK_113P63132 956 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 TNFAIP8L3Q5GJ75 292 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 RNF130Q86XS8 419 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 OR10H5Q8NGA6 315 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 TMEM209Q96SK2 561 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SLC35A5Q9BS91 424 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ERVK-6Q9BXR3 956 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 MEIS3P1A6NDR6 274 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 HK1P19367 917 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 RGS1Q08116 209 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 GNA13Q14344 377 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SFRP4Q6FHJ7 346 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 CAPN13Q6MZZ7 669 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 ZNF773Q6PK81 442 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 LYSMD3Q7Z3D4 306 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ASB9Q96DX5 294 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FBXL18Q96ME1 805 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PHOX2BQ99453 314 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAIM2Q9BWQ8 316 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 POLR2J3Q9H1A7 115 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 OR51B5Q9H339 312 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 BCAS2O75934 225 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 AXLP30530 894 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 RGS19P49795 217 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ITIH5Q86UX2 942 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM83FQ8NEG4 500 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 OR4F6Q8NGB9 312 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SUSD6Q92537 303 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 TMEM185BQ9H7F4 350 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 NUDT4Q9NZJ9 180 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 CYTH4Q9UIA0 394 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM72CH0Y354 149 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 H3BNH8 94 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PAPSS2O95340 614 aaPredicted RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 SLC35G4P0C7Q5 338 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 PREPP48147 710 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM72AQ5TYM5 149 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM72DQ6L9T8 149 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 TLDC1Q6P9B6 456 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM72BQ86X60 149 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 THUMPD1Q9NXG2 353 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 TRAV19A0A0A6YYK7 116 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 TLL1O43897 1013 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 RBM48Q5RL73 367 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 UNC93AQ86WB7 457 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ANKRA2Q9H9E1 313 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ADAP2Q9NPF8 381 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ZFR2Q9UPR6 939 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM208AQ9UK61 1670 aaKnown RBP7.33□□□□□ -1.24
RIF1-201ENST00000243326 CAV3P56539 151 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SLBPQ14493 270 aaKnown RBP eCLIP7.33□□□□□ -1.24
RIF1-201ENST00000243326 WASH2PQ6VEQ5 465 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 CEP76Q8TAP6 659 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 GPR20Q99678 358 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 OCEL1Q9H607 264 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 SLC22A14Q9Y267 594 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 ABCA4P78363 2273 aa7.33□□□□□ -1.24
RIF1-201ENST00000243326 FAM234BA2RU67 622 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ELOA3DA6NLF2 546 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ATF6P18850 670 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CEACAM7Q14002 265 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CBX2Q14781 532 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ELOA3BQ3SY89 546 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CRB2Q5IJ48 1285 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ANKFN1Q8N957 763 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ELOA3Q8NG57 546 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MAL2Q969L2 176 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 UTP4Q969X6 686 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 TSSK6Q9BXA6 273 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MOV10Q9HCE1 1003 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ZDHHC4Q9NPG8 344 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 NUFIP1Q9UHK0 495 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 CCNCP24863 283 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 RGL4Q8IZJ4 473 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FNDC8Q8TC99 324 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ZNF675Q8TD23 568 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 LRRC3Q9BY71 257 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OR10A4Q9H209 315 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 METTL8Q9H825 291 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 SIAEQ9HAT2 523 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 GPR83Q9NYM4 423 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms