RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MTRRQ9UBK8 725 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 LEF1Q9UJU2 399 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 STOML2Q9UJZ1 356 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PCTPQ9UKL6 214 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 DMTF1Q9Y222 760 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PCDHB1Q9Y5F3 818 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 RAI2Q9Y5P3 530 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 DHRS12A0PJE2 317 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 ANKRD66B4E2M5 251 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 STX7O15400 261 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 SNX2O60749 519 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 EEDO75530 441 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GJB3O75712 270 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 PIRTP0C851 137 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 ATP6V1B2P21281 511 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 PSMA4P25789 261 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 RGRP47804 291 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 FOXA1P55317 472 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 KCNK10P57789 538 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 ERVK-8P63133 956 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GRB7Q14451 532 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 AASDHQ4L235 1098 aaPredicted RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 HMBOX1Q6NT76 420 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 METTL2BQ6P1Q9 378 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 ZBTB49Q6ZSB9 765 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 RNF165Q6ZSG1 346 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GPRIN3Q6ZVF9 776 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 SATL1Q86VE3 508 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GPSM1Q86YR5 675 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 CAMK1DQ8IU85 385 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 CFAP52Q8N1V2 620 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GALNT4Q8N4A0 578 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 PAPD5Q8NDF8 572 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 MDGA1Q8NFP4 955 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 CD200R1Q8TD46 325 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 RGMAQ96B86 450 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 DTNBP1Q96EV8 351 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF512Q96ME7 567 aaPredicted RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 NACA2Q9H009 215 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 RBM38Q9H0Z9 239 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 STARD7Q9NQZ5 370 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 NCDNQ9UBB6 729 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 SRRDQ9UH36 339 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 AFF4Q9UHB7 1163 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 PTBP2Q9UKA9 531 aaKnown RBP7.68□□□□□ -1.18
CXCR4-201ENST00000241393 FAM50BQ9Y247 325 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 SNX13Q9Y5W8 968 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 GBF1Q92538 1859 aa7.68□□□□□ -1.18
CXCR4-201ENST00000241393 FAM234BA2RU67 622 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 EME2A4GXA9 379 aaPredicted RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 LRRC14BA6NHZ5 514 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 DBX1A6NMT0 343 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CDC7O00311 574 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 BTN3A1O00481 513 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 PPP6CO00743 305 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 COCHO43405 550 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 NOBOXO60393 691 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 SLC22A3O75751 556 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 STC2O76061 302 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 H6PDO95479 791 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 C8AP07357 584 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 LINC00032P0C843 101 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 ARSAP15289 507 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF23P17027 643 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 RPS3P23396 243 aaKnown RBP eCLIP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 FASP25445 335 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CORO1AP31146 461 aaKnown RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 GRIA3P42263 894 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 ATXN3P54252 364 aaPredicted RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 RPS24P62847 133 aaKnown RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 SP3Q02447 781 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CACNG1Q06432 222 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 SLC5A9Q2M3M2 681 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 VMACQ2NL98 169 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 SMU1Q2TAY7 513 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 VPS26BQ4G0F5 336 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 KCTD21Q4G0X4 260 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 MTX3Q5HYI7 312 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 NHSL2Q5HYW2 709 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 NCEH1Q6PIU2 408 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 LAYNQ6UX15 382 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 B3GNT6Q6ZMB0 384 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 ADAMTSL2Q86TH1 951 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 SYVN1Q86TM6 617 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 LRRC43Q8N309 656 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CARNMT1Q8N4J0 409 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 TMEM199Q8N511 208 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 DPP10Q8N608 796 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 PNPLA1Q8N8W4 532 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 TRPV3Q8NET8 790 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 LPCAT1Q8NF37 534 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 DBF4BQ8NFT6 615 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 OR5M3Q8NGP4 307 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CANT1Q8WVQ1 401 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 TMEM125Q96AQ2 219 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 CENPNQ96H22 339 aaPredicted RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 PRPF18Q99633 342 aaKnown RBP7.67□□□□□ -1.18
CXCR4-201ENST00000241393 HGH1Q9BTY7 390 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 C9orf16Q9BUW7 83 aa7.67□□□□□ -1.18
CXCR4-201ENST00000241393 P2RY12Q9H244 342 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms