RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HMGXB4Q9UGU5 601 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 MLC1Q15049 377 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CLNKQ7Z7G1 428 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 GKN2Q86XP6 184 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CREG2Q8IUH2 290 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ZNF701Q9NV72 531 aaPredicted RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 OR4F21O95013 312 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ID2Q02363 134 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 KREMEN2Q8NCW0 462 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CCNL2Q96S94 520 aaPredicted RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 DIP2BQ9P265 1576 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 WNT9AO14904 365 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 PTGS2P35354 604 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 NPAS4Q8IUM7 802 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 PQLC1Q8N2U9 271 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 LPGAT1Q92604 370 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 DGCR14Q96DF8 476 aaKnown RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 GIN1Q9NXP7 522 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 NUDT4Q9NZJ9 180 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ABCG2Q9UNQ0 655 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 DOCK7Q96N67 2140 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 AGPSO00116 658 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 HRGP04196 525 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 GP1BBP13224 206 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CTHP32929 405 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CRHR1P34998 444 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 GNG2P59768 71 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 E2F1Q01094 437 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 LRRC66Q68CR7 880 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 NODALQ96S42 347 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 A0A1W2PRQ8 180 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ACTL6BO94805 426 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 DECR1Q16698 335 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SMURF2Q9HAU4 748 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 A0A1W2PQ45 241 aaPredicted RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 A0A1W2PQY0 241 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 RHBDL3P58872 404 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 FAPQ12884 760 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 TIGD6Q17RP2 521 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 FAM156AQ8NDB6 213 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 FBP2O00757 339 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 GDPD4Q6W3E5 623 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ESAMQ96AP7 390 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 BMP8BP34820 402 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CRHR2Q13324 411 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 BMP8AQ7Z5Y6 402 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 RMI1Q9H9A7 625 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 TRMUO75648 421 aaKnown RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 INHAP05111 366 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 BCKDHAP12694 445 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 RHEBQ15382 184 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 HINT2Q9BX68 163 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 SPATA31C2B4DYI2 1134 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 DLDP09622 509 aaKnown RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 ZNF347Q96SE7 839 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CPXM1Q96SM3 734 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
NEK9-201ENST00000238616 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 MLLT10P55197 1068 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEK9-201ENST00000238616 TTLQ8NG68 377 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 PTCH2Q9Y6C5 1203 aa12.88□□□□□ -0.35
NEK9-201ENST00000238616 ASTN1O14525 1302 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms