RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CDKL2Q92772 493 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ESAMQ96AP7 390 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 RHBDF1Q96CC6 855 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ATOH8Q96SQ7 321 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 MESP1Q9BRJ9 268 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 AICDAQ9GZX7 198 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-201ENST00000230480 MRPS30Q9NP92 439 aaKnown RBP13.12□□□□□ -0.31
VEGFA-201ENST00000230480 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 BOD1L1Q8NFC6 3051 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 FOXS1O43638 330 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 STATHP02808 62 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 C2P06681 752 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ENO2P09104 434 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 STMN1P16949 149 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CYP2A7P20853 494 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 AP1S2P56377 157 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 VSX2P58304 361 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ABATP80404 500 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CDKL1Q00532 357 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CSHL1Q14406 222 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 HKDC1Q2TB90 917 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CRTC2Q53ET0 693 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 MROH9Q5TGP6 573 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 TLDC1Q6P9B6 456 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 TMEM151AQ8N4L1 468 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 AMER2Q8N7J2 671 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 KCTD4Q8WVF5 259 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 EXTL1Q92935 676 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 MR1Q95460 341 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 KIAA1191Q96A73 305 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 NXNL1Q96CM4 212 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 MOCOSQ96EN8 888 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CYTH2Q99418 400 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 SARGQ9BW04 601 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ABCF3Q9NUQ8 709 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 TMEM184CQ9NVA4 438 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ARGLU1Q9NWB6 273 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ARL15Q9NXU5 204 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ANKMY1Q9P2S6 941 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 ZNF462Q96JM2 2506 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
VEGFA-201ENST00000230480 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
VEGFA-201ENST00000230480 KCNE1BA0A087WTH5 132 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 ATXN7O15265 892 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 RIPK2O43353 540 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 DNAJB6O75190 326 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CREG1O75629 220 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 TBX6O95947 436 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 MT-ND3P03897 115 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 RAB40ALP0C0E4 278 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 SBK3P0C264 359 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CDH1P12830 882 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 PTPN4P29074 926 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 GGT5P36269 586 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 BCL6P41182 706 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CDC20Q12834 499 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 TSTA3Q13630 321 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 TGFBIQ15582 683 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 UAP1Q16222 522 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 ENDOVQ8N8Q3 282 aaKnown RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 MZB1Q8WU39 189 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CLIP3Q96DZ5 547 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 ZFYVE21Q9BQ24 234 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 SNX15Q9NRS6 342 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CUTCQ9NTM9 273 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 CTNNAL1Q9UBT7 734 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 PTBP2Q9UKA9 531 aaKnown RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 RUVBL1Q9Y265 456 aaKnown RBP13.1□□□□□ -0.31
VEGFA-201ENST00000230480 SLC22A14Q9Y267 594 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 AP1M2Q9Y6Q5 423 aa13.1□□□□□ -0.31
VEGFA-201ENST00000230480 FEZF1A0PJY2 475 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 HYKKA2RU49 373 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
VEGFA-201ENST00000230480 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 C21orf140B9A014 251 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 DSCR3O14972 297 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 RECKO95980 971 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 PRB1P04280 392 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 UMODP07911 640 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 ABHD2P08910 425 aa13.09□□□□□ -0.31
VEGFA-201ENST00000230480 CCNYL3P0C7X3 344 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms