RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 YIPF4Q9BSR8 244 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TAPBPLQ9BX59 468 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 MRM3Q9HC36 420 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 FBXL12Q9NXK8 326 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 PTTG2Q9NZH5 202 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TMED5Q9Y3A6 229 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 EDDM13A0A1B0GTR0 161 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 ZBTB42B2RXF5 422 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 RLN1P04808 185 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 ALPPP05187 535 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 SRPRAP08240 638 aaKnown RBP11.21□□□□□ -0.62
NOD1-201ENST00000222823 FOXM1Q08050 763 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 ABHD18Q0P651 414 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TEAD2Q15562 447 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 SLC30A6Q6NXT4 461 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 LGI4Q8N135 537 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 HMGB4Q8WW32 186 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 PMEPA1Q969W9 287 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 KCNA7Q96RP8 456 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 ANKHQ9HCJ1 492 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 TRIM39Q9HCM9 518 aa11.21□□□□□ -0.62
NOD1-201ENST00000222823 COCHO43405 550 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 FAM189A1O60320 539 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 GJB5O95377 273 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 AVPR1BP47901 424 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 IQCCQ4KMZ1 466 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 RABL3Q5HYI8 236 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 OR2T5Q6IEZ7 315 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 SLC8B1Q6J4K2 584 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 KLHL24Q6TFL4 600 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 SMG8Q8ND04 991 aaKnown RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 OR2T29Q8NH02 315 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 FCGR1BQ92637 280 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 TMBIM1Q969X1 311 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 IMP4Q96G21 291 aaKnown RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 GPER1Q99527 375 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 CCDC106Q9BWC9 280 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 ADAMTS10Q9H324 1103 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 TBC1D17Q9HA65 648 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 GIMAP2Q9UG22 337 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 ITGB1BP2Q9UKP3 347 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 A0A0J9YVX5 310 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 TMEM150CB9EJG8 249 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 CNMDO75829 334 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 SYN1P17600 705 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 DNAJA1P31689 397 aaKnown RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 TGFBR2P37173 567 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 RAB25P57735 213 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 EMX2Q04743 252 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 CRTC2Q53ET0 693 aaPredicted RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 NRSN1Q8IZ57 195 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 EFHD2Q96C19 240 aaPredicted RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 TMEM74Q96NL1 305 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 IFT27Q9BW83 186 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 TPT1P8Q9HAU6 139 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 NLE1Q9NVX2 485 aaPredicted RBP11.2□□□□□ -0.62
NOD1-201ENST00000222823 COPS7AQ9UBW8 275 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 PRSS51A0A1B0GVH4 220 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 LEFTY2O00292 366 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 DCLK1O15075 740 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 GKP32189 559 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 CDK6Q00534 326 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 SCN1BQ07699 218 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 EIPR1Q53HC9 387 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 ZNF678Q5SXM1 525 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 BTN2A1Q7KYR7 527 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 OR10H4Q8NGA5 316 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 NEK7Q8TDX7 302 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 KCNN2Q9H2S1 579 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 OR51B5Q9H339 312 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 TLR9Q9NR96 1032 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 CLDND1Q9NY35 253 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 RNF11Q9Y3C5 154 aa11.2□□□□□ -0.62
NOD1-201ENST00000222823 IFNA6P05013 189 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 IL4RP24394 825 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 BDKRB1P46663 353 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 ARFIP1P53367 373 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 CBX3Q13185 183 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SUZ12Q15022 739 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 KLHL22Q53GT1 634 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 IQCHQ86VS3 1027 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 FBXO15Q8NCQ5 510 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 TRPV1Q8NER1 839 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 OR10T2Q8NGX3 314 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 PEX13Q92968 403 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 PKP2Q99959 881 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 P2RX2Q9UBL9 471 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 DHRS7Q9Y394 339 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 RPL36Q9Y3U8 105 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 ZNF99A8MXY4 864 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms