RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEM184CQ9NVA4 438 aa26.17■■□□□ 1.78
CHMP4B-201ENST00000217402 UBFD1O14562 309 aaKnown RBP26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 HAT1O14929 419 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 CHRNGP07510 517 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 CD22P20273 847 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 ARRB2P32121 409 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 MLLT3P42568 568 aaPredicted RBP26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 INHBCP55103 352 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 SLBPQ14493 270 aaKnown RBP eCLIP26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 NAA25Q14CX7 972 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 ARHGAP22Q7Z5H3 698 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 ZUFSPQ96AP4 578 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF382Q96SR6 550 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 DRC3Q9H069 523 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF768Q9H5H4 540 aaKnown RBP26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 MID1IP1Q9NPA3 183 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 RNF11Q9Y3C5 154 aa26.16■■□□□ 1.78
CHMP4B-201ENST00000217402 COL27A1Q8IZC6 1860 aaPredicted RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 OR2A25A4D2G3 310 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 TOX3O15405 576 aaPredicted RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 LYPLA1O75608 230 aaPredicted RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 MT-CO3P00414 261 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ANKRD34CP0C6C1 535 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 HRH2P25021 359 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ZFP36L1Q07352 338 aaKnown RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 BST1Q10588 318 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 STX3Q13277 289 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ARL13AQ5H913 290 aaPredicted RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 CDCP2Q5VXM1 449 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 FAM219BQ5XKK7 198 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 GPRIN3Q6ZVF9 776 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 MILR1Q7Z6M3 343 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 SYVN1Q86TM6 617 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 TRIM42Q8IWZ5 723 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF740Q8NDX6 193 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 OR4F6Q8NGB9 312 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 PTCD3Q96EY7 689 aaKnown RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 TMEM74Q96NL1 305 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 TRMOQ9BU70 441 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 EHD1Q9H4M9 534 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 MANSC1Q9H8J5 431 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF395Q9H8N7 513 aaPredicted RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 FAM60AQ9NP50 221 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 GEMIN8Q9NWZ8 242 aaKnown RBP26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 SEMA5BQ9P283 1151 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 ANKMY1Q9P2S6 941 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 KLK4Q9Y5K2 254 aa26.15■■□□□ 1.78
CHMP4B-201ENST00000217402 FEZF1A0PJY2 475 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 ITM2AO43736 263 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 WFS1O76024 890 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 CLDN9O95484 217 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 GRK2P25098 689 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 ERVPABLB-1P60509 514 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 CYP4F3Q08477 520 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 KCNAB1Q14722 419 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 LETMD1Q6P1Q0 360 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 FAM129CQ86XR2 697 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 LSMEM2Q8N112 164 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 OR4K1Q8NGD4 311 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 AGAP11Q8TF27 550 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 KLHL6Q8WZ60 621 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 TCTN2Q96GX1 697 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 FCRL4Q96PJ5 515 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 AIF1LQ9BQI0 150 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 EFCAB11Q9BUY7 163 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 NTMT1Q9BV86 223 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 ZNF225Q9UK10 706 aa26.14■■□□□ 1.78
CHMP4B-201ENST00000217402 CNOT1A5YKK6 2376 aaKnown RBP26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 TMEM114B3SHH9 223 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 CTSVO60911 334 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 OR4F21O95013 312 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 HSPA4LO95757 839 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 ABCE1P61221 599 aaKnown RBP26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 SH3BP2P78314 561 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 HSD11B2P80365 405 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 REEP5Q00765 189 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 TBCCQ15814 346 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 DEFB110Q30KQ9 67 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 ATG14Q6ZNE5 492 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 ZNF75CPQ92670 426 aaPredicted RBP26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 WDR34Q96EX3 536 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 SLC41A2Q96JW4 573 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 PDE7BQ9NP56 450 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 CLCA2Q9UQC9 943 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 STK38LQ9Y2H1 464 aa26.14■■□□□ 1.77
CHMP4B-201ENST00000217402 MAP3K7O43318 606 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 CSO75390 466 aaKnown RBP26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 EBLN1P0CF75 366 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 NELFEP18615 380 aaKnown RBP26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 GRK3P35626 688 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 SERPINB5P36952 375 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 SLC1A6P48664 564 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 PCDH1Q08174 1060 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 TRA2AQ13595 282 aaKnown RBP eCLIP26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 C16orf72Q14CZ0 275 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 ATG16L1Q676U5 607 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 CUZD1Q86UP6 607 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 KMT5CQ86Y97 462 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 RAB3IL1Q8TBN0 382 aa26.13■■□□□ 1.77
CHMP4B-201ENST00000217402 LRRC8CQ8TDW0 803 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms