RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 OR6M1Q8NGM8 313 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 SPPL2AQ8TCT8 520 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 PYURFQ96I23 114 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 OR52E6Q96RD3 313 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 ADAM30Q9UKF2 790 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 TMX2Q9Y320 296 aa14.25□□□□□ -0.13
PTPRA-201ENST00000216877 NINQ8N4C6 2090 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 CD3EAPO15446 510 aaKnown RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 RHOBTB1O94844 696 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ARSBP15848 533 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 CLCN4P51793 760 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 PWP1Q13610 501 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF79Q15937 498 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 GIMAP1Q8WWP7 306 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SLC9A6Q92581 669 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 MTFMTQ96DP5 389 aaKnown RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 FAM126AQ9BYI3 521 aaPredicted RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 NRBP2Q9NSY0 501 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 EDARQ9UNE0 448 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 PI15O43692 258 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 CSKP41240 450 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 TSNQ15631 228 aaKnown RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SLC35F1Q5T1Q4 408 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 TRAPPC12Q8WVT3 735 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SLC13A3Q8WWT9 602 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 IL4I1Q96RQ9 567 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 GDF15Q99988 308 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 CHIAQ9BZP6 476 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SRRQ9GZT4 340 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SPNS1Q9H2V7 528 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 PDLIM7Q9NR12 457 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 HPF1Q9NWY4 346 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ENOPH1Q9UHY7 261 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 FZD10Q9ULW2 581 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 A3GALT2U3KPV4 340 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 BTN3A1O00481 513 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 GPX5O75715 221 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SCELO95171 688 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ALDH1A1P00352 501 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 PFKMP08237 780 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 CPT1AP50416 773 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 RPS7P62081 194 aaKnown RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 OR4D1Q15615 310 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 TUSC1Q2TAM9 212 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 FAM209BQ5JX69 171 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 SPANXN4Q5MJ08 99 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF549Q6P9A3 640 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF782Q6ZMW2 699 aaPredicted RBP14.24□□□□□ -0.13
PTPRA-201ENST00000216877 NPWQ8N729 165 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF566Q969W8 418 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 MED10Q9BTT4 135 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 ASB7Q9H672 318 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 HCN3Q9P1Z3 774 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 HSPE1-MOB4S4R3N1 261 aa14.24□□□□□ -0.13
PTPRA-201ENST00000216877 RAB19A4D1S5 217 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 GFRA2O00451 464 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 VPS4BO75351 444 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 HOXD4P09016 255 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 EFNA1P20827 205 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 CPN2P22792 545 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 CLCN5P51795 746 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 CXCR4P61073 352 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 MAXP61244 160 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 RBM22Q9NW64 420 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 THUMPD1Q9NXG2 353 aaKnown RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 NKIRAS2Q9NYR9 191 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 LOC105369274A0A096LPK9 316 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 CLCA1A8K7I4 914 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 H0YC42 278 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 SIGLEC5O15389 551 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 GMDSO60547 372 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 LRATO95237 230 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 PRAMEF1O95521 474 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 MLYCDO95822 493 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 CYP17A1P05093 508 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 SYPP08247 313 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 DCDC1P59894 354 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 SIGLEC14Q08ET2 396 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 GRIK2Q13002 908 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 TMEM132DQ14C87 1099 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 PDE12Q6L8Q7 609 aaKnown RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 MPZL3Q6UWV2 235 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 TMEM207Q6UWW9 146 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 DLEU7Q6UYE1 221 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 OR4N4Q8N0Y3 316 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 VPS37AQ8NEZ2 397 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 COQ8AQ8NI60 647 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 C1GALT1C1Q96EU7 318 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 EXOC2Q96KP1 924 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 COPZ2Q9P299 210 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF624Q9P2J8 865 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 NCKAP1Q9Y2A7 1128 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms