RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 OIP5O43482 229 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC34A2O95436 690 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 IRF2P14316 349 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 IDH3GP51553 393 aaPredicted RBP14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 NFATC4Q14934 902 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 PDE12Q6L8Q7 609 aaKnown RBP14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF808Q8N4W9 903 aaPredicted RBP14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 ANKRD52Q8NB46 1076 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRC4CQ9HCJ2 640 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 HIF1ANQ9NWT6 349 aa14.27□□□□□ -0.13
SPTLC2-201ENST00000216484 TSHRP16473 764 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PTF1AQ7RTS3 328 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CYP2W1Q8TAV3 490 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CD180Q99467 661 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TMEM100Q9NV29 134 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 GRHPRQ9UBQ7 328 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 A0A1W2PQ67 120 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ACTL6BO94805 426 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ADAP00813 363 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CYP1A2P05177 515 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CRISP3P54108 245 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ADGRE1Q14246 886 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ARL13AQ5H913 290 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 AQP11Q8NBQ7 271 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 STON2Q8WXE9 905 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PKP4Q99569 1192 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PCDHB16Q9NRJ7 776 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 NUDT4Q9NZJ9 180 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 SH3BGRL2Q9UJC5 107 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 RP1L1Q8IWN7 2480 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PSMD10O75832 226 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 SP2Q02086 613 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 EIF2B1Q14232 305 aaKnown RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PLA2G15Q8NCC3 412 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TMEM125Q96AQ2 219 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 RNF13O43567 381 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 GNAZP19086 355 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CDKAL1Q5VV42 579 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 KANK2Q63ZY3 851 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CYP4V2Q6ZWL3 525 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 OR4C15Q8NGM1 316 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 FCRL2Q96LA5 508 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 NUFIP1Q9UHK0 495 aaKnown RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TRPM1Q7Z4N2 1603 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 LOC100130705A0A1B0GUX0 176 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 A0A1B0GVI7 797 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 APOC3P02656 99 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PAX3P23760 479 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TRAPPC6BQ86SZ2 158 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 C12orf40Q86WS4 652 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 TCEANCQ8N8B7 351 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 AZIN2Q96A70 460 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 MYRFLQ96LU7 910 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ACSS3Q9H6R3 686 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF705GA8MUZ8 300 aaPredicted RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 NDUFS4O43181 175 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 IFNA17P01571 189 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CAPN3P20807 821 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CBLP22681 906 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PARP15Q460N3 678 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 BBS12Q6ZW61 710 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 MRM3Q9HC36 420 aaKnown RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 BIN3Q9NQY0 253 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 AGPSO00116 658 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 PIP5K1CO60331 668 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 SCELO95171 688 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 CORO1AP31146 461 aaKnown RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 FGL1Q08830 312 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 FBXO43Q4G163 708 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF584Q8IVC4 421 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF781Q8N8C0 355 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 OR10G2Q8NGC3 310 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 P2RY11Q96G91 374 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC41A3Q96GZ6 507 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
SPTLC2-201ENST00000216484 A0A1W2PQH9 124 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 BOLA2-SMG1P6H3BVE0 249 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 GRIA2P42262 883 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 RIDAP52758 137 aaKnown RBP14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF460Q14592 562 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 SLC25A52Q3SY17 297 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 CDNFQ49AH0 187 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 GPR75-ASB3A0A0A6YYF3 556 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 HYAL2Q12891 473 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 OR6Q1Q8NGQ2 317 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 SLITRK3O94933 977 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 CSF2P04141 144 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 ZNF41P51814 821 aaPredicted RBP14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
SPTLC2-201ENST00000216484 OR8K3Q8NH51 312 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms