RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TMEM138Q9NPI0 162 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 ENPP5Q9UJA9 477 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 GTF2A1LQ9UNN4 478 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 HAS3O00219 553 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 DCLK1O15075 740 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 ESR1P03372 595 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 CD247P20963 164 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 BMPR1AP36894 532 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 DPP6P42658 865 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 DCDC1P59894 354 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 ABHD18Q0P651 414 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 ST3GAL4Q11206 333 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 CHIT1Q13231 466 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 USP45Q70EL2 814 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 CEP295NLQ96MC4 621 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 TEFMQ96QE5 360 aaKnown RBP11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 MTERF1Q99551 399 aaKnown RBP11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 MARCH4Q9P2E8 410 aaPredicted RBP11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 PCDHB1Q9Y5F3 818 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 CLCA3PQ9Y6N3 262 aa11.23□□□□□ -0.61
DNMT3B-201ENST00000201963 DDX60LQ5H9U9 1706 aaKnown RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CCNB2O95067 398 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CDRT1O95170 752 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 PRAMEF1O95521 474 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 VIPP01282 170 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 MYL9P24844 172 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 WASP42768 502 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CLK3P49761 638 aaKnown RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 EMX2Q04743 252 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 SPATS1Q496A3 300 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CXorf57Q6NSI4 855 aaKnown RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 RETREG3Q86VR2 466 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 C9orf43Q8TAL5 461 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 C3orf30Q96M34 536 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 BBS4Q96RK4 519 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 ANKMY1Q9P2S6 941 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 IFT52Q9Y366 437 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 C12orf71A8MTZ7 269 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 HTR2BP41595 481 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CDKN2DP55273 166 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 SMIM11AP58511 58 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 PARP15Q460N3 678 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 TRNP1Q6NT89 227 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 MACC1Q6ZN28 852 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 Q7L0L9 218 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 SYVN1Q86TM6 617 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 ALPK1Q96QP1 1244 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 GINS4Q9BRT9 223 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 SYNDIG1Q9H7V2 258 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 BAIAP2Q9UQB8 552 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 B3GNT3Q9Y2A9 372 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 OAS3Q9Y6K5 1087 aaKnown RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 A6NL46 340 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 HPRP00739 348 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 RPS3P23396 243 aaKnown RBP eCLIP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CRHBPP24387 322 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 CD40LGP29965 261 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 FOXA1P55317 472 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 GSTM4Q03013 218 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 HECTD3Q5T447 861 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 C7orf57Q8NEG2 295 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 TEX47Q8TBZ9 253 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 KCNE2Q9Y6J6 123 aa11.22□□□□□ -0.61
DNMT3B-201ENST00000201963 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 TPST2O60704 377 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 KLHL18O94889 574 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 NPPAP01160 153 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 STSP08842 583 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 SHMT2P34897 504 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 ARSDP51689 593 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 SNRPD2P62316 118 aaKnown RBP11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 SOX4Q06945 474 aaPredicted RBP11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 MAB21L1Q13394 359 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 GALNT10Q86SR1 603 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 ISCA2Q86U28 154 aa11.21□□□□□ -0.61
DNMT3B-201ENST00000201963 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms