RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 FAM129CQ86XR2 697 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 KCNJ9Q92806 393 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ZHX1-C8orf76Q96EF9 292 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 HSPBAP1Q96EW2 488 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ETAA1Q9NY74 926 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ZDHHC3Q9NYG2 299 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 CDH7Q9ULB5 785 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 CYP8B1Q9UNU6 501 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PCDHGA7Q9Y5G6 932 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 STON1Q9Y6Q2 735 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 A0A1B0GVG6 124 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PRLP01236 227 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ALDOCP09972 364 aaKnown RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ATP1B2P14415 290 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 FDXRP22570 491 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 AZGP1P25311 298 aaKnown RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ADRA1AP35348 466 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 EIF2B2P49770 351 aaKnown RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 CTSCP53634 463 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF33AQ06730 810 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 SLBPQ14493 270 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ERMP1Q7Z2K6 904 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 SLCO6A1Q86UG4 719 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF557Q8N988 423 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 HTRA1Q92743 480 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 MYADMQ96S97 322 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PLAC1Q9HBJ0 212 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 TREX1Q9NSU2 369 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 FBXW2Q9UKT8 454 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 SARDHQ9UL12 918 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 GTF2A1LQ9UNN4 478 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 HEMK1Q9Y5R4 338 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PSMD11O00231 422 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 OR1F1O43749 312 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 GMFGO60234 142 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 IFNA14P01570 189 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 C6P13671 934 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 VIPR1P32241 457 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 CCR4P51679 360 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 DNAJB13P59910 316 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 NFE2L1Q14494 772 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 FRG2Q64ET8 278 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 CXorf40BQ96DE9 158 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 FRG2BQ96QU4 278 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 NUSAP1Q9BXS6 441 aaKnown RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 TMEM245Q9H330 911 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ACTR3BQ9P1U1 418 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 SLC9A8Q9Y2E8 581 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 IGLV3-10A0A075B6K4 115 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SMIM30A4D0T7 59 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 MANBAO00462 879 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PTGER1P34995 402 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ELP6Q0PNE2 266 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 BRAT1Q6PJG6 821 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 GPR65Q8IYL9 337 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 KCNC2Q96PR1 638 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 IL4I1Q96RQ9 567 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 DUSP26Q9BV47 211 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CFHR5Q9BXR6 569 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TRIM45Q9H8W5 580 aaPredicted RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 DHRS7Q9Y394 339 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TSC22D4Q9Y3Q8 395 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LOC285095A0A1B0GVY8 99 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 KLK1P06870 262 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TNFRSF1BP20333 461 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ARL4DP49703 201 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 FBXW4P57775 412 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 MXD1Q05195 221 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LYPLAL1Q5VWZ2 237 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 Q7L0L9 218 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SCML4Q8N228 414 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 MTERF3Q96E29 417 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SCRN2Q96FV2 425 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 NODALQ96S42 347 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PKP4Q99569 1192 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 NUAK2Q9H093 628 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SLC32A1Q9H598 525 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 C11orf16Q9NQ32 467 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CMTM6Q9NX76 183 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CDC14AQ9UNH5 594 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PDE10AQ9Y233 779 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CACNB4O00305 520 aaPredicted RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PCDH7O60245 1069 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 NDUFS2O75306 463 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RAP2AP10114 183 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LHCGRP22888 699 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SPINT3P49223 89 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TRAF3Q13114 568 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 DAG1Q14118 895 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 UBE2J2Q8N2K1 259 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms