RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C10orf142B7Z368 130 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 H0YJX3 145 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 CACNB4O00305 520 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 ETHE1O95571 254 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 PCNAP12004 261 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 PTPN6P29350 595 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 KIR3DL1P43629 444 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 TRPC1P48995 793 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 CLCNKAP51800 687 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 RAE1P78406 368 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 CAMKMTQ7Z624 323 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 FAM129CQ86XR2 697 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 SPPL2CQ8IUH8 684 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 SYT12Q8IV01 421 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 ADGRG5Q8IZF4 528 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 PAPD5Q8NDF8 572 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 TNIP2Q8NFZ5 429 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 CANT1Q8WVQ1 401 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 SMPDL3AQ92484 453 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 ZNF583Q96ND8 569 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 TRIM8Q9BZR9 551 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 PITHD1Q9GZP4 211 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 WASH6PQ9NQA3 447 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 DMRT3Q9NQL9 472 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 ADGRE2Q9UHX3 823 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 SHISA7A6NL88 538 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 BMP2P12643 396 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 ACP5P13686 325 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 PSMA4P25789 261 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 OR4D2P58180 307 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 MTPNP58546 118 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 RPS13P62277 151 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 PPP2CBP62714 309 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 PPP2CAP67775 309 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 SELPLGQ14242 412 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 LRRC36Q1X8D7 754 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 GRAMD1BQ3KR37 738 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 ERMP1Q7Z2K6 904 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 GPR180Q86V85 440 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 RAB42Q8N4Z0 105 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 C1orf52Q8N6N3 182 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 ABHD11Q8NFV4 315 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 OR52E4Q8NGH9 312 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 CXorf40BQ96DE9 158 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 EGLN2Q96KS0 407 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 NT5DC2Q9H857 520 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 FAM120CQ9NX05 1096 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 LIMD1Q9UGP4 676 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
RTFDC1-201ENST00000023939 PRR23AA6NEV1 266 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 SCN2BO60939 215 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 GGT1P19440 569 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 IL10P22301 178 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 HRH2P25021 359 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 SERPINB1P30740 379 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TIA1P31483 386 aaKnown RBP eCLIP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 GTF2A1P52655 376 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 PHEXP78562 749 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 CCINQ13939 588 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 UGT8Q16880 541 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 THEMIS2Q5TEJ8 643 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ADNP2Q6IQ32 1131 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 CHST15Q7LFX5 561 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 IFNEQ86WN2 208 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 C17orf64Q86WR6 236 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 CALHM3Q86XJ0 350 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ANKFN1Q8N957 763 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TRPV3Q8NET8 790 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 RAB11FIP5Q9BXF6 653 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 EBPLQ9BY08 206 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 RHBGQ9H310 441 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 GORASP2Q9H8Y8 452 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 WDR37Q9Y2I8 494 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 TDRKHQ9Y2W6 561 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 F5P12259 2224 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 A0A1W2PPV9 198 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ANXA4P09525 319 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 ACADMP11310 421 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 FCGR1AP12314 374 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 CDH1P12830 882 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 UQCRBP14927 111 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 NDUFV2P19404 249 aa13.78□□□□□ -0.2
RTFDC1-201ENST00000023939 IDSP22304 550 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms