RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 DNMT3BQ9UBC3 853 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 OARD1Q9Y530 152 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 TOGARAM1Q9Y4F4 1720 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 H0YGN5 161 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 MUSKO15146 869 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CHN2P52757 468 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CDH12P55289 794 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 XIAPP98170 497 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ADGRG6Q86SQ4 1221 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ARL10Q8N8L6 244 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 GIPC3Q8TF64 312 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 NXPE3Q969Y0 559 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 MGME1Q9BQP7 344 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 RNF11Q9Y3C5 154 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 AK5Q9Y6K8 562 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 AGPSO00116 658 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ECDO95905 644 aaPredicted RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 C1GALT1C1LP0DN25 315 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 TNFRSF4P43489 277 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 GALK1P51570 392 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CASP9P55211 416 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 HERC3Q15034 1050 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF542PQ5EBM4 170 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 LYSMD4Q5XG99 296 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 NPWQ8N729 165 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 OR52J3Q8NH60 311 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 OR4C6Q8NH72 309 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CLPTM1LQ96KA5 538 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 OLFM1Q99784 485 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 LRRC3Q9BY71 257 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 METTL7AQ9H8H3 244 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 PNPLA3Q9NST1 481 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 C15orf41Q9Y2V0 281 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 SPIN1Q9Y657 262 aaPredicted RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 MPZL2O60487 215 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 JUNP05412 331 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 AHCYP23526 432 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 AFF1P51825 1210 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 GPR68Q15743 365 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 DUOXA1Q1HG43 343 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC9B1Q4ZJI4 515 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 CRTC1Q6UUV9 634 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 ZDHHC1Q8WTX9 485 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 HHIPQ96QV1 700 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 PRTFDC1Q9NRG1 225 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM120CQ9NX05 1096 aaKnown RBP10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 HCSTQ9UBK5 93 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 RARRES3Q9UL19 164 aa10.05□□□□□ -0.8
NIPAL3-201ENST00000003912 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 AKAP8O43823 692 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 GADD45GO95257 159 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 HYAL2Q12891 473 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 LCN1P1Q5VSP4 162 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 UNC5DQ6UXZ4 953 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 IZUMO1Q8IYV9 350 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SPPL3Q8TCT6 385 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SH3GL3Q99963 347 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 C17orf62Q9BQA9 187 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 YIPF4Q9BSR8 244 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 CKLFQ9UBR5 152 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 MAST2Q6P0Q8 1798 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 CLIC1O00299 241 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 LDOC1O95751 146 aaPredicted RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SERPINA1P01009 418 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 BPIP17213 487 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ATF6P18850 670 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 PTDSS1P48651 473 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 MTPNP58546 118 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 DNAJB13P59910 316 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 RPS15AP62244 130 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC18A2Q05940 514 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 MGAT3Q09327 533 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 OR4F3Q6IEY1 312 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ATCAYQ86WG3 371 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SVOPLQ8N434 492 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 RFKQ969G6 155 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 NMD3Q96D46 503 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 MSANTD3Q96H12 275 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 EPYCQ99645 322 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SPATA9Q9BWV2 254 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF624Q9P2J8 865 aaPredicted RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 FZD4Q9ULV1 537 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 OR1A2Q9Y585 309 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 USP3Q9Y6I4 520 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 CHST10O43529 356 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 CYP17A1P05093 508 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ASGR2P07307 311 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 FBLP22087 321 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 HHEXQ03014 270 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 TRIM25Q14258 630 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms