RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 GSDMCQ9BYG8 508 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SLC6A17Q9H1V8 727 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 OR6C2Q9NZP2 312 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 POLR3HQ9Y535 204 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PCDHB11Q9Y5F2 797 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PCDHGA2Q9Y5H1 932 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PTGDR2Q9Y5Y4 395 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PLXND1Q9Y4D7 1925 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 DOCK9Q9BZ29 2069 aa9.4□□□□□ -0.91
PHGDH-215ENST00000641371 A0A1W2PPC4 97 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 PIPSLA2A3N6 862 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 NDUFS2O75306 463 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 G6PDP11413 515 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 AMD1P17707 334 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 PTX3P26022 381 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 PKLRP30613 574 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 GRK3P35626 688 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SRP54P61011 504 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 NFYCQ13952 458 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 KPNB1Q14974 876 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 UBXN2BQ14CS0 331 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 KIAA0040Q15053 153 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 ZXDCQ2QGD7 858 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 AASDHQ4L235 1098 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 RFTN2Q52LD8 501 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 USP39Q53GS9 565 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SGO1Q5FBB7 561 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 IRAK1BP1Q5VVH5 260 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 ANO7Q6IWH7 933 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 GALNT18Q6P9A2 607 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SCIMPQ6UWF3 145 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 GCNT7Q6ZNI0 430 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SDR16C5Q8N3Y7 309 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 OR7G3Q8NG95 312 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 PROKR1Q8TCW9 393 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 NEIL2Q969S2 332 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 CLDN23Q96B33 292 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 ERLEC1Q96DZ1 483 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 CAMK1GQ96NX5 476 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 NPAS2Q99743 824 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 GPATCH1Q9BRR8 931 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 C1orf50Q9BV19 199 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 RHBGQ9H310 441 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 VCX3BQ9H321 246 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 CLMPQ9H6B4 373 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 FGF22Q9HCT0 170 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 GPR27Q9NS67 375 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 TMEM181Q9P2C4 612 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 STX18Q9P2W9 335 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 ABCD2Q9UBJ2 740 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 EBF1Q9UH73 591 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 CA14Q9ULX7 337 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 POMPQ9Y244 141 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 TDRKHQ9Y2W6 561 aaKnown RBP9.39□□□□□ -0.91
PHGDH-215ENST00000641371 L3MBTL1Q9Y468 752 aa9.39□□□□□ -0.91
PHGDH-215ENST00000641371 SZT2Q5T011 3432 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 KIR2DS5A0A0G2JLQ3 304 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 A0A0G2JNG1 304 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 POM121BA6NF01 834 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 ANKDD1BA6NHY2 528 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 KIR2DS3K7RE56 304 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 FBP2O00757 339 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 ANKRD28O15084 1053 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
PHGDH-215ENST00000641371 KCNH1O95259 989 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 PSMG1O95456 288 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 IGHV4-34P06331 123 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 BCKDHAP12694 445 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 HSD17B1P14061 328 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 IL9P15248 144 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 CAPN3P20807 821 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 CD27P26842 260 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 GCKP35557 465 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 HPCAL1P37235 193 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 EEFSECP57772 596 aaKnown RBP9.38□□□□□ -0.91
PHGDH-215ENST00000641371 UFM1P61960 85 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 REEP5Q00765 189 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 HMGCS1Q01581 520 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 ZP2Q05996 745 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 PRDX1Q06830 199 aaKnown RBP9.38□□□□□ -0.91
PHGDH-215ENST00000641371 KIR2DS5Q14953 304 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 RPE65Q16518 533 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 ZNF423Q2M1K9 1284 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 CCSMST1Q4G0I0 132 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 NOXRED1Q6NXP6 359 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 TMIGD1Q6UXZ0 262 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 MAMSTRQ6ZN01 415 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 Q6ZSR6 202 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 IKBIPQ70UQ0 350 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 PAGE2Q7Z2X7 111 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 R3HCC1LQ7Z5L2 792 aaKnown RBP9.38□□□□□ -0.91
PHGDH-215ENST00000641371 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 TMEM126BQ8IUX1 230 aa9.38□□□□□ -0.91
PHGDH-215ENST00000641371 HID1Q8IV36 788 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms