RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 DNAJA1P31689 397 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 MPIP34949 423 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 GALK1P51570 392 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CDH15P55291 814 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 DSTNP60981 165 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 RPS13P62277 151 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ALKAL1Q6UXT8 129 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 PEX5LQ8IYB4 626 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 OR10G2Q8NGC3 310 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 OR10Q1Q8NGQ4 319 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 MAPK15Q8TD08 544 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ZUFSPQ96AP4 578 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 POLMQ9NP87 494 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 PRSS56P0CW18 603 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ALAS2P22557 587 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 RAB14P61106 215 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 OR4D1Q15615 310 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 NCEH1Q6PIU2 408 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 FAM98AQ8NCA5 519 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF248Q8NDW4 579 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 SLC5A11Q8WWX8 675 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CHCHD6Q9BRQ6 235 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CXCL16Q9H2A7 254 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 TCRBV5S1A1TA0A578 114 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 TSPAN6O43657 245 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 NDUFS1P28331 727 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 PIK3CBP42338 1070 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 MZT2BQ6NZ67 158 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 KLHL17Q6TDP4 642 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 KDELC1Q6UW63 502 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 NATD1Q8N6N6 113 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 KDM1BQ8NB78 822 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 OR52B6Q8NGF0 335 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 KAT2AQ92830 837 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 POLR2J3Q9H1A7 115 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CASKO14936 926 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 AIREO43918 545 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 MYL9P24844 172 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 TAS2R50P59544 299 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 DCUN1D3Q8IWE4 304 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 SCML4Q8N228 414 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF563Q8TA94 476 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 LRIG1Q96JA1 1093 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 ATXN10Q9UBB4 475 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 PGAP2Q9UHJ9 254 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 KCNK6Q9Y257 313 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 SCN7AQ01118 1682 aa17.08■□□□□ 0.33
SCARB2-223ENST00000640640 NRAPQ86VF7 1730 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 ZNF8P17098 575 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 KHKP50053 298 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CNPY1Q3B7I2 92 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 SPATS1Q496A3 300 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 C11orf88Q6PI97 169 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 NPAS3Q8IXF0 933 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CADM2Q8N3J6 435 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 PIGXQ8TBF5 258 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 RAB2BQ8WUD1 216 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 C11orf16Q9NQ32 467 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 OARD1Q9Y530 152 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 SPO11Q9Y5K1 396 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 SH3BP2P78314 561 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CDK6Q00534 326 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 ZNF776Q68DI1 518 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CXXC5Q7LFL8 322 aaKnown RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 IZUMO1Q8IYV9 350 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 TRIM8Q9BZR9 551 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 MRTO4Q9UKD2 239 aaKnown RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 ACTL7AQ9Y615 435 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 HAT1O14929 419 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 B3GALT2O43825 422 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CBFA2T3O75081 653 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 RFPL2O75678 378 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 GSRP00390 522 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 GCAP28676 217 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-223ENST00000640640 TICAM1Q8IUC6 712 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.32
SCARB2-223ENST00000640640 GRID2O43424 1007 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 TSC22D2O75157 780 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 ALDH4A1P30038 563 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 KCNC3Q14003 757 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 TOMM20Q15388 145 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
SCARB2-223ENST00000640640 LGI4Q8N135 537 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 UXS1Q8NBZ7 420 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 AIG1Q9NVV5 245 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 PRORSD1PA6NEY8 169 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 RSL1D1O76021 490 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms