RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 APCDD1Q8J025 514 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 HERVK_113Q902F9 699 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 C12orf43Q96C57 262 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PYURFQ96I23 114 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CCM2LQ9NUG4 571 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 AIG1Q9NVV5 245 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 BCKDHAP12694 445 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CD247P20963 164 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 RPL26P61254 145 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 KCNAB2Q13303 367 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 SMARCD3Q6STE5 483 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF534Q76KX8 674 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF554Q86TJ5 538 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 UBE2J2Q8N2K1 259 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PHC3Q8NDX5 983 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 DIRAS2Q96HU8 199 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 SLC35G5Q96KT7 338 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 RBMX2Q9Y388 322 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 INSL6Q9Y581 213 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PLOD3O60568 738 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 CMPK1P30085 196 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 CDK6Q00534 326 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 MORN1Q5T089 497 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 BLOC1S3Q6QNY0 202 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 PRR23CQ6ZRP0 262 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 USP30Q70CQ3 517 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 KRT74Q7RTS7 529 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 PIANPQ8IYJ0 282 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 CADM2Q8N3J6 435 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 TMEM145Q8NBT3 493 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 KCT2Q8NC54 265 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 KHSRPQ92945 711 aaKnown RBP eCLIP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 RELTQ969Z4 430 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 TRPS1Q9UHF7 1281 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 COQ6Q9Y2Z9 468 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 EFCAB9A8MZ26 197 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 LEFTY1O75610 366 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 OR5F1O95221 314 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 SYN1P17600 705 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 HMGCLP35914 325 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 ACTR1BP42025 376 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 FOXA1P55317 472 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 ACTR1AP61163 376 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 PRR5P85299 388 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 ILF3Q12906 894 aaKnown RBP eCLIP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 LARS2Q15031 903 aaKnown RBP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 TMIGD1Q6UXZ0 262 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 KBTBD6Q86V97 674 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 NRG4Q8WWG1 115 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 FUBP1Q96AE4 644 aaKnown RBP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 FCRL4Q96PJ5 515 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 RANBP9Q96S59 729 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 IGSF5Q9NSI5 407 aa14.02□□□□□ -0.16
SCARB2-216ENST00000639300 MRPS33Q9Y291 106 aaKnown RBP14.02□□□□□ -0.16
SCARB2-216ENST00000639300 GPR39O43194 453 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 SLC35G6P0C7Q6 338 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 PCSK2P16519 638 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 CAPN3P20807 821 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 PRMT2P55345 433 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 TMEM115Q12893 351 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-216ENST00000639300 CYP27C1Q4G0S4 372 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 NOXRED1Q6NXP6 359 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 TSPAN33Q86UF1 283 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 HSH2DQ96JZ2 352 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 CNPPD1Q9BV87 410 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 PRDM8Q9NQV8 689 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 PLAGL1Q9UM63 463 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 COLEC10Q9Y6Z7 277 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 XPNPEP2O43895 674 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 ADH5P11766 374 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF8P17098 575 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-216ENST00000639300 ATP4BP51164 291 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 QPRTQ15274 297 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 KIAA0319Q5VV43 1072 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 NEK5Q6P3R8 708 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 KDELC1Q6UW63 502 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 BEND5Q7L4P6 421 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.17
SCARB2-216ENST00000639300 SLC45A3Q96JT2 553 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 POLR2J2Q9GZM3 115 aaKnown RBP14.02□□□□□ -0.17
SCARB2-216ENST00000639300 ZDHHC4Q9NPG8 344 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 DLGAP4Q9Y2H0 992 aa14.02□□□□□ -0.17
SCARB2-216ENST00000639300 TRBC2A0A5B9 178 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 FAM86C2PA6NEL3 165 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 PGRMC2O15173 223 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TEX28O15482 410 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TSPAN6O43657 245 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CYBAP13498 195 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CCL5P13501 91 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CSF2RAP15509 400 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ELK4P28324 431 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 OR1E2P47887 323 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CLCN4P51793 760 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms