RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 GPR135Q8IZ08 494 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 DSELQ8IZU8 1212 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 DTWD1Q8N5C7 304 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 ANKRD7Q92527 254 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 PTERQ96BW5 349 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 SGPP1Q9BX95 441 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 TXLNGYQ9BZA5 131 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 CHST8Q9H2A9 424 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 CTNNAL1Q9UBT7 734 aa20.87■□□□□ 0.93
SCN1B-206ENST00000638536 NOVA2Q9UNW9 492 aaKnown RBP20.87■□□□□ 0.93
SCN1B-206ENST00000638536 H7BY64 318 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 NKX2-8O15522 239 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ZSCAN9O15535 394 aaPredicted RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 MT-ND3P03897 115 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ATXN8OSP0DMR3 200 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 NPPBP16860 134 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 KCNC1P48547 511 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 CSRP3P50461 194 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 AP1S2P56377 157 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 VSX2P58304 361 aaPredicted RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 C1orf189Q5VU69 101 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 FAM69BQ5VUD6 431 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 PRAMEF13Q5VWM6 474 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 MR1Q95460 341 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 FBXL8Q96CD0 374 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ZNF285Q96NJ3 590 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 PRAP1Q96NZ9 151 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 OR4K3Q96R72 315 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 IRAK4Q9NWZ3 460 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 KALRNO60229 2985 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 MED26O95402 600 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 CAPN1P07384 714 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ENO2P09104 434 aaPredicted RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 RPS18P62269 152 aaKnown RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 IRF9Q00978 393 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ILF2Q12905 390 aaKnown RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 OR4D1Q15615 310 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ZC3H12BQ5HYM0 836 aaKnown RBP20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ATP1A1-AS1Q5TC04 95 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 OR56A3Q8NH54 315 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 SLC44A1Q8WWI5 657 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 SLC45A3Q96JT2 553 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 LRFN5Q96NI6 719 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 TRIM54Q9BYV2 358 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 EPB41L4BQ9H329 900 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 ANKZF1Q9H8Y5 726 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 OARD1Q9Y530 152 aa20.86■□□□□ 0.93
SCN1B-206ENST00000638536 SCN3AQ9NY46 2000 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 HAT1O14929 419 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 NFKB2Q00653 900 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 DNASE1L3Q13609 305 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 WASHC2DQ5SRD0 308 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 RAPH1Q70E73 1250 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 KIAA1143Q96AT1 154 aaPredicted RBP20.85■□□□□ 0.93
SCN1B-206ENST00000638536 PAFAH2Q99487 392 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 SELENOSQ9BQE4 189 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 SLC7A5P2Q9GIP4 190 aa20.85■□□□□ 0.93
SCN1B-206ENST00000638536 MED13Q9UHV7 2174 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 NCF1BA6NI72 391 aaPredicted RBP20.84■□□□□ 0.93
SCN1B-206ENST00000638536 NCF1CA8MVU1 366 aaPredicted RBP20.84■□□□□ 0.93
SCN1B-206ENST00000638536 POC1B-GALNT4F8VUJ3 575 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 KATNA1O75449 491 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 ALDOAP04075 364 aaKnown RBP20.84■□□□□ 0.93
SCN1B-206ENST00000638536 NCF1P14598 390 aaPredicted RBP20.84■□□□□ 0.93
SCN1B-206ENST00000638536 ABATP80404 500 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 FBXO48Q5FWF7 155 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 RHBDD2Q6NTF9 364 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 TMEM151BQ8IW70 566 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 STARD8Q92502 1023 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 GBP5Q96PP8 586 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 ZFYVE21Q9BQ24 234 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 SNX15Q9NRS6 342 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 IGSF5Q9NSI5 407 aa20.84■□□□□ 0.93
SCN1B-206ENST00000638536 H0YGG7 62 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 RIPK2O43353 540 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 EIF2S1P05198 315 aaKnown RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 C2P06681 752 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 KLK3P07288 261 aaPredicted RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 GCAP28676 217 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 PMS2P54278 862 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 ARF3P61204 181 aaPredicted RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 SNRPNP63162 240 aaKnown RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 TGFBIQ15582 683 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 TLDC1Q6P9B6 456 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 PCSK4Q6UW60 755 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 FAM198BQ6UWH4 519 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 LCTLQ6UWM7 567 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 ADCK2Q7Z695 626 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 ADAMTSL2Q86TH1 951 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 CENPLQ8N0S6 344 aaPredicted RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 DCAKDQ8WVC6 231 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 KCTD4Q8WVF5 259 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 NXNL1Q96CM4 212 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 BBC3Q96PG8 261 aaPredicted RBP20.83■□□□□ 0.93
SCN1B-206ENST00000638536 OR2A5Q96R48 311 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 AP1M2Q9Y6Q5 423 aa20.83■□□□□ 0.93
SCN1B-206ENST00000638536 A0A087WUV0 522 aaPredicted RBP20.82■□□□□ 0.92
SCN1B-206ENST00000638536 CCNDBP1O95273 360 aa20.82■□□□□ 0.92
SCN1B-206ENST00000638536 STATHP02808 62 aa20.82■□□□□ 0.92
SCN1B-206ENST00000638536 FURINP09958 794 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms