RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MYO1HQ8N1T3 1032 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 AGGF1Q8N302 714 aaeCLIP18.11■□□□□ 0.49
CLN6-221ENST00000637494 METTL27Q8N6F8 245 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 C2CD4AQ8NCU7 369 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 ZNF480Q8WV37 535 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 MFRPQ9BY79 579 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 SOX17Q9H6I2 414 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 SLC6A20Q9NP91 592 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 MAP10Q9P2G4 905 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 ZNF282Q9UDV7 671 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 MAU2Q9Y6X3 613 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 TNRC6AQ8NDV7 1962 aaKnown RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 E7ENX8 843 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 H0YGG7 62 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 FBLP22087 321 aaKnown RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 ITGA3P26006 1051 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 ARF3P61204 181 aaPredicted RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 DR1Q01658 176 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 TAP2Q03519 686 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 MORF4L2Q15014 288 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 FBXO42Q6P3S6 717 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 PAQR7Q86WK9 346 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 CSNK1A1LQ8N752 337 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 PPFIBP2Q8ND30 876 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 PNPLA2Q96AD5 504 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 MIEF2Q96C03 454 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 NAPGQ99747 312 aaPredicted RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 YIPF2Q9BWQ6 316 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 CCDC177Q9NQR7 707 aaPredicted RBP18.1■□□□□ 0.49
CLN6-221ENST00000637494 MED16Q9Y2X0 877 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 SAR1BQ9Y6B6 198 aa18.1■□□□□ 0.49
CLN6-221ENST00000637494 NDC80O14777 642 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 C8GP07360 202 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 ANXA5P08758 320 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 HIST1H2AGP0C0S8 130 aaPredicted RBP18.09■□□□□ 0.49
CLN6-221ENST00000637494 HIST1H2ADP20671 130 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 HRH2P25021 359 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 RELAQ04206 551 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 SP140Q13342 867 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 UBAP2LQ14157 1087 aaKnown RBP18.09■□□□□ 0.49
CLN6-221ENST00000637494 TUBB8Q3ZCM7 444 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CYHR1Q6ZMK1 362 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 SHISA6Q6ZSJ9 500 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 COX15Q7KZN9 410 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 PIWIL4Q7Z3Z4 852 aaKnown RBP18.09■□□□□ 0.49
CLN6-221ENST00000637494 ZADH2Q8N4Q0 377 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 MVB12AQ96EY5 273 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CERS2Q96G23 380 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 HIST1H2AHQ96KK5 128 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CCDC138Q96M89 665 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 NDNQ99608 321 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 SPSB2Q99619 263 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 HIST1H2AJQ99878 128 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 H2AFJQ9BTM1 129 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CRB3Q9BUF7 120 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 PCBD2Q9H0N5 130 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CTSFQ9UBX1 484 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 FBXL4Q9UKA2 621 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 MYO18BQ8IUG5 2567 aa18.09■□□□□ 0.49
CLN6-221ENST00000637494 CCDC188H7C350 402 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 NRP2O60462 931 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 SORBS2O94875 1100 aaKnown RBP18.08■□□□□ 0.48
CLN6-221ENST00000637494 ARL4CP56559 192 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 SOX8P57073 446 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 FOXL2P58012 376 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 YBX1P67809 324 aaKnown RBP18.08■□□□□ 0.48
CLN6-221ENST00000637494 PDAP1Q13442 181 aaKnown RBP18.08■□□□□ 0.48
CLN6-221ENST00000637494 NDUFA9Q16795 377 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 PRTGQ2VWP7 1150 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 GARNL3Q5VVW2 1013 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 PRAMEF13Q5VWM6 474 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 SLC6A19Q695T7 634 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 GALNT11Q8NCW6 608 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 EEF1AKMT1Q8WVE0 214 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 LRRC39Q96DD0 335 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 CFAP36Q96G28 342 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 SLC29A3Q9BZD2 475 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 CORO1CQ9ULV4 474 aaPredicted RBP18.08■□□□□ 0.48
CLN6-221ENST00000637494 FER1L5A0AVI2 2057 aa18.08■□□□□ 0.48
CLN6-221ENST00000637494 BSNQ9UPA5 3926 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 VSTM2BA6NLU5 285 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 SLC16A5O15375 505 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 BANF1O75531 89 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 ZGLP1P0C6A0 271 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 CCND1P24385 295 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 IMPA1P29218 277 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 ELK3P41970 407 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 INPP5JQ15735 1006 aaPredicted RBP18.07■□□□□ 0.48
CLN6-221ENST00000637494 HIF1AQ16665 826 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 ZNF425Q6IV72 752 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 GALNT7Q86SF2 657 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 CNTN4Q8IWV2 1026 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 IQCKQ8N0W5 287 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 FAM26EQ8N5C1 309 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 RBMXL3Q8N7X1 1067 aaKnown RBP18.07■□□□□ 0.48
CLN6-221ENST00000637494 STT3BQ8TCJ2 826 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 MMABQ96EY8 250 aaPredicted RBP18.07■□□□□ 0.48
CLN6-221ENST00000637494 TRIM54Q9BYV2 358 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 ILKAPQ9H0C8 392 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms