RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DNAJC8O75937 253 aaPredicted RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 EML2O95834 649 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 PDYNP01213 254 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 ALDOCP09972 364 aaKnown RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 EZRP15311 586 aaKnown RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 CXCR2P25025 360 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 PIK3R1P27986 724 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 C21orf59P57076 290 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 HNRNPKP61978 463 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLN6-219ENST00000637329 UBE2IP63279 158 aaKnown RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 PHEXP78562 749 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 ABATP80404 500 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 EMX2Q04743 252 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 SLBPQ14493 270 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLN6-219ENST00000637329 TEAD4Q15561 434 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 HIST2H2ACQ16777 129 aaPredicted RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 C6orf136Q5SQH8 315 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 LYSMD4Q5XG99 296 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 PMS2CLQ68D20 193 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 HIST2H2AA3Q6FI13 130 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 MED27Q6P2C8 311 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 SUSD1Q6UWL2 747 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TAF8Q7Z7C8 310 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 GKN2Q86XP6 184 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TRIM48Q8IWZ4 208 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 LAS2Q8IYD9 372 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TMEFF1Q8IYR6 380 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 DEFB119Q8N690 84 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 RP9Q8TA86 221 aaKnown RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 SH3KBP1Q96B97 665 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 ACPTQ9BZG2 426 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TWSG1Q9GZX9 223 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TCEAL2Q9H3H9 227 aaPredicted RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 SDR39U1Q9NRG7 319 aaPredicted RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 NOP53Q9NZM5 478 aaKnown RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 ZNF624Q9P2J8 865 aaPredicted RBP14.81□□□□□ -0.04
CLN6-219ENST00000637329 SPASTQ9UBP0 616 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 SUSD2Q9UGT4 822 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TAC3Q9UHF0 121 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 KLF15Q9UIH9 416 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 PPT2Q9UMR5 302 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 TMED5Q9Y3A6 229 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 PCDHB11Q9Y5F2 797 aa14.81□□□□□ -0.04
CLN6-219ENST00000637329 WDR87Q6ZQQ6 2873 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 PIPSLA2A3N6 862 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 CFAP73A6NFT4 308 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 BCAT2O15382 392 aaPredicted RBP14.8□□□□□ -0.04
CLN6-219ENST00000637329 PEX11AO75192 247 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 THRAP10827 490 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 COX4I1P13073 169 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 HRH2P25021 359 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 PTPN4P29074 926 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 SLC19A1P41440 591 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ACTN3Q08043 901 aaPredicted RBP14.8□□□□□ -0.04
CLN6-219ENST00000637329 TSTA3Q13630 321 aaPredicted RBP14.8□□□□□ -0.04
CLN6-219ENST00000637329 PDCD4Q53EL6 469 aaKnown RBP14.8□□□□□ -0.04
CLN6-219ENST00000637329 FAM219BQ5XKK7 198 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ICE2Q659A1 982 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ASRGL1Q7L266 308 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 AMIGO1Q86WK6 493 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ZFAND4Q86XD8 727 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 FAM9CQ8IZT9 166 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 KRT78Q8N1N4 520 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 MIER2Q8N344 545 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 SFRP1Q8N474 314 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ABHD11Q8NFV4 315 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 LCN9Q8WX39 176 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 SLC22A18Q96BI1 424 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 KLHL29Q96CT2 875 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 MARK4Q96L34 752 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 CNTNAP3BQ96NU0 1288 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 CNTNAP3Q9BZ76 1288 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 C1orf21Q9H246 121 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 NT5DC2Q9H857 520 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ERVMER34-1Q9H9K5 563 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 LRTM1Q9HBL6 345 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 SLC40A1Q9NP59 571 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 C1orf109Q9NX04 203 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 ADGRE2Q9UHX3 823 aa14.8□□□□□ -0.04
CLN6-219ENST00000637329 A0A1B0GTW7 788 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 PSMD12O00232 456 aaPredicted RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 FOXE1O00358 373 aaPredicted RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 FKBP9O95302 570 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 VIPP01282 170 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 CDH1P12830 882 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 VARSP26640 1264 aaKnown RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 MAOBP27338 520 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 GSTM2P28161 218 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 MAPK1P28482 360 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 PIK3CBP42338 1070 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 DPP6P42658 865 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 CCR8P51685 355 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 CORO7P57737 925 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 REEP5Q00765 189 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 KIR2DS3Q14952 304 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 KIF19Q2TAC6 998 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 AP5B1Q2VPB7 878 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 PRRT3Q5FWE3 981 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 TSSK4Q6SA08 328 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms