RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 MOV10Q9HCE1 1003 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FAM86C1Q9NVL1 165 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CACNG4Q9UBN1 327 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LSM7Q9UK45 103 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LINC01553A4QN01 128 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 UPK3BL1B0FP48 263 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ANKRD66B4E2M5 251 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 UPK3BL2E5RIL1 263 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 H7C0S8 307 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PLK4O00444 970 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 MANBAO00462 879 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF197O14709 1029 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SLC16A6O15403 523 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ASNA1O43681 348 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PRSS23O95084 383 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 IGSF6O95976 241 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SERPINA1P01009 418 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 KRT8P05787 483 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 C8GP07360 202 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CNPP09543 421 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SP9P0CG40 484 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 IL7RP16871 459 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ITGA2P17301 1181 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 S100A1P23297 94 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HOXA6P31267 233 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HPCAL1P37235 193 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 RPL3P39023 403 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 KIR3DL1P43629 444 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 MAPK9P45984 424 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PNLIPRP1P54315 467 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ERVPABLB-1P60509 514 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 WDR5P61964 334 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HTRA4P83105 476 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PLIN5Q00G26 463 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ARHGEF7Q14155 803 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 INAQ16352 499 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ANXA8L1Q5VT79 327 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 RNF219Q5W0B1 726 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 OR2T5Q6IEZ7 315 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CXCL17Q6UXB2 119 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CD300LGQ6UXG3 332 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF852Q6ZMS4 543 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PRR23CQ6ZRP0 262 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 GPR149Q86SP6 731 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 KRT73Q86Y46 540 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SLC15A4Q8N697 577 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 OR7D4Q8NG98 312 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 OR2T29Q8NH02 315 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 MCFD2Q8NI22 146 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZFPM2Q8WW38 1151 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ATL1Q8WXF7 558 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF566Q969W8 418 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 EFHD2Q96C19 240 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF641Q96N77 438 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 FUNDC2Q9BWH2 189 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CD244Q9BZW8 370 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ASB8Q9H765 288 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 DCAF13Q9NV06 445 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SAMHD1Q9Y3Z3 626 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 GPC6Q9Y625 555 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PCM1Q15154 2024 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SZT2Q5T011 3432 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PKD1L2Q7Z442 2459 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 E2F3O00716 465 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ENPP3O14638 875 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 GUCA1CO95843 209 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ALDH2P05091 517 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 OR4Q2P0C623 313 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ACRP10323 421 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ASMTP46597 345 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PPP3CCP48454 512 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HSPA7P48741 367 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HNMTP50135 292 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 HNRNPFP52597 415 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 BCL2L1Q07817 233 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CD47Q08722 323 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CDH18Q13634 790 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 NPTX1Q15818 432 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 MEP1AQ16819 746 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SDHAF4Q5VUM1 108 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF691Q5VV52 312 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 GDF6Q6KF10 455 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 UNC5DQ6UXZ4 953 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 FAM92BQ6ZTR7 304 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 USP43Q70EL4 1123 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CYP2U1Q7Z449 544 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SERPINA9Q86WD7 417 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SYT12Q8IV01 421 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 TTC29Q8NA56 475 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF548Q8NEK5 533 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 C9orf43Q8TAL5 461 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 GRIN3AQ8TCU5 1115 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PHF10Q8WUB8 498 aaKnown RBP3.87□□□□□ -1.79
SCN1A-214ENST00000637038 PPP1R13LQ8WUF5 828 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 SLC39A7Q92504 469 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 CMTM7Q96FZ5 175 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 RDH14Q9HBH5 336 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF304Q9HCX3 659 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 RAD18Q9NS91 495 aa3.87□□□□□ -1.79
SCN1A-214ENST00000637038 IMPAD1Q9NX62 359 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms