RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ENAMQ9NRM1 1142 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 GALPQ9UBC7 116 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
PNKP-225ENST00000636214 FBXO5Q9UKT4 447 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 B3GNT3Q9Y2A9 372 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
PNKP-225ENST00000636214 DOCK10Q96BY6 2186 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 LOC105369274A0A096LPK9 316 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 LOC102723532A0A0G2JNH3 316 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 H0YGG7 62 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 SMAPO00193 183 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 TXNDC9O14530 226 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 MAP2K7O14733 419 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 ANXA5P08758 320 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 PGAM1P18669 254 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 RGS4P49798 205 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 ABATP80404 500 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 AGAP7PQ5VUJ5 663 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 ICE2Q659A1 982 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 COX15Q7KZN9 410 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 PCGF5Q86SE9 256 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 PRSS58Q8IYP2 241 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 OR4N4Q8N0Y3 316 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 CSNK1A1LQ8N752 337 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 NAT8LQ8N9F0 302 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 FBXO15Q8NCQ5 510 aaPredicted RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 AGAP4Q96P64 663 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 GPR21Q99679 349 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 EBNA1BP2Q99848 306 aaKnown RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 ZNF552Q9H707 407 aaPredicted RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 LRRC4CQ9HCJ2 640 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 IARS2Q9NSE4 1012 aaKnown RBP17.11■□□□□ 0.33
PNKP-225ENST00000636214 DHRS7Q9Y394 339 aa17.11■□□□□ 0.33
PNKP-225ENST00000636214 SPENQ96T58 3664 aaKnown RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 PCSK5Q92824 1860 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 TTC4O95801 387 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 SLC16A8O95907 504 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 UQCRHP07919 91 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 F7P08709 466 aaPredicted RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 SOX8P57073 446 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 PRDX1Q06830 199 aaKnown RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 PRR30Q53SZ7 412 aaPredicted RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 UBE2R2Q712K3 238 aaPredicted RBP17.1■□□□□ 0.33
PNKP-225ENST00000636214 PAQR7Q86WK9 346 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 STT3BQ8TCJ2 826 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 MVB12AQ96EY5 273 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 SLC30A3Q99726 388 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 EPS8L2Q9H6S3 715 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 HS3ST3B1Q9Y662 390 aa17.1■□□□□ 0.33
PNKP-225ENST00000636214 CLEC18AA5D8T8 446 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 MASP2O00187 686 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CES2O00748 559 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 SOCS6O14544 535 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 NRP2O60462 931 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ALOX12BO75342 701 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ZGLP1P0C6A0 271 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ACPPP15309 386 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CXCR2P25025 360 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 MAGEA3P43357 314 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 EMP3P54852 163 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 MPP1Q00013 466 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 KLC1Q07866 573 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ELOAQ14241 798 aaKnown RBP17.09■□□□□ 0.33
PNKP-225ENST00000636214 NDUFA9Q16795 377 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 HSP90AA5PQ58FG0 334 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 GARNL3Q5VVW2 1013 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 FBXO42Q6P3S6 717 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 IGFL3Q6UXB1 125 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CLEC18BQ6UXF7 455 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CPNE9Q8IYJ1 553 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 Q8NA96 180 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CLEC18CQ8NCF0 446 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CD200R1Q8TD46 325 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 MCOLN3Q8TDD5 553 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ZNF480Q8WV37 535 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ASB11Q8WXH4 323 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 WDR77Q9BQA1 342 aaPredicted RBP17.09■□□□□ 0.33
PNKP-225ENST00000636214 NAT9Q9BTE0 207 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 LHPPQ9H008 270 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 CCDC177Q9NQR7 707 aaPredicted RBP17.09■□□□□ 0.33
PNKP-225ENST00000636214 C14orf105Q9NVL8 296 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 TAS2R13Q9NYV9 303 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 TRPC4Q9UBN4 977 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 C3orf18Q9UK00 162 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 SNX12Q9UMY4 172 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 NEU2Q9Y3R4 380 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 ICE1Q9Y2F5 2266 aa17.09■□□□□ 0.33
PNKP-225ENST00000636214 BLACEA4D250 179 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 VSTM2BA6NLU5 285 aa17.08■□□□□ 0.32
PNKP-225ENST00000636214 E7ENX8 843 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms