RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 C14orf79Q96F83 325 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 GPR137Q96N19 417 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ZFYVE21Q9BQ24 234 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ACAT2Q9BWD1 397 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ZNF700Q9H0M5 742 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 MCCC2Q9HCC0 563 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 GPAMQ9HCL2 828 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 KLHL1Q9NR64 748 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ANKRD10Q9NXR5 420 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 SLC2A6Q9UGQ3 507 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 MKL2Q9ULH7 1088 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
PNKP-218ENST00000625299 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 NFS1Q9Y697 457 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 IGHV3-20A0A0C4DH32 117 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 A0A1W2PQ72 361 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 NPIPA5E9PKD4 350 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 H0YGG7 62 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 TTI1O43156 1089 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 ZNHIT1O43257 154 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 ICAM2P13598 275 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 MAGEA1P43355 309 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 ARF3P61204 181 aaPredicted RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 YBX1P67809 324 aaKnown RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 TSTA3Q13630 321 aaPredicted RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 SEMA3AQ14563 771 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 HKDC1Q2TB90 917 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 PRTGQ2VWP7 1150 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 FASTKD1Q53R41 847 aaKnown RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 MFSD4BQ5TF39 518 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 C11orf63Q6NUN7 778 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 AADACL2Q6P093 401 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 LDB1Q86U70 411 aaPredicted RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 CSNK1A1LQ8N752 337 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 OR52K1Q8NGK4 314 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 OR13J1Q8NGT2 312 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 POM121Q96HA1 1249 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 DPH7Q9BTV6 452 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 TUBB6Q9BUF5 446 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 HES7Q9BYE0 225 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 NPIPA1Q9UND3 350 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 RUVBL1Q9Y265 456 aaKnown RBP13.93□□□□□ -0.18
PNKP-218ENST00000625299 SCN2AQ99250 2005 aa13.93□□□□□ -0.18
PNKP-218ENST00000625299 LOC102723996A0A087X1L8 192 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 A0A0A6YYC8 382 aaPredicted RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 I3L1I5 382 aaPredicted RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 VPS26AO75436 327 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 SEC24DO94855 1032 aaPredicted RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 NADKO95544 446 aaPredicted RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 C1orf105O95561 183 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 MLYCDO95822 493 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 C8orf89P0DMQ9 161 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 ABOP16442 354 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 AOAHP28039 575 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 CMPK1P30085 196 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 CTNNA1P35221 906 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 CSNK1G2P78368 415 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 MAT1AQ00266 395 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 FASTKQ14296 549 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 BTBD16Q32M84 506 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 P3H1Q32P28 736 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 PTRHD1Q6GMV3 140 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 C3P1Q6ZMU1 363 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 ZC3H7AQ8IWR0 971 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 BEST3Q8N1M1 668 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 AMER3Q8N944 861 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 OR2A1Q8NGT9 310 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 OR4L1Q8NH43 312 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 SPOCK3Q9BQ16 436 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 CARD6Q9BX69 1037 aa13.92□□□□□ -0.18
PNKP-218ENST00000625299 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 R3HDM2Q9Y2K5 976 aaKnown RBP13.92□□□□□ -0.18
PNKP-218ENST00000625299 A0A0U1RQJ8 604 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 OR2A25A4D2G3 310 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 FANCGO15287 622 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 CBFA2T2O43439 604 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 SLCO2B1O94956 709 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 TJP3O95049 919 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 GAS8O95995 478 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 PSMA3P25788 255 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 SLC26A3P40879 764 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 EFNA3P52797 238 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 PRAMEP78395 509 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 KRTCAP3Q53RY4 240 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 FBXO42Q6P3S6 717 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 ZNF534Q76KX8 674 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 AGAP11Q8TF27 550 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 THAP3Q8WTV1 239 aaPredicted RBP13.91□□□□□ -0.18
PNKP-218ENST00000625299 CA5BP1Q8WTZ4 195 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 METTL21AQ8WXB1 218 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 SDCCAG3Q96C92 435 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 IMMP1LQ96LU5 166 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms