RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 INPP5KQ9BT40 448 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 BDH2Q9BUT1 245 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 MRPS26Q9BYN8 205 aaKnown RBP19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 DPEP2Q9H4A9 486 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 ZNF639Q9UID6 485 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 ANTXRLA6NF34 631 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM220BPB1ANY3 271 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 POP7O75817 140 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 SCELO95171 688 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 MT-ND1P03886 318 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 PABPC4LP0CB38 370 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 KIR3DL1P43629 444 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 GZMMP51124 257 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 C21orf58P58505 322 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 ROR2Q01974 943 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 SRSF11Q05519 484 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 CNTN1Q12860 1018 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 DDX39BQ13838 428 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 PYCR3Q53H96 274 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 AP1ARQ63HQ0 302 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 CAPN13Q6MZZ7 669 aaPredicted RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 ISLR2Q6UXK2 745 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 GCNT7Q6ZNI0 430 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 SLCO4C1Q6ZQN7 724 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 ANKRD46Q86W74 232 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 MICU2Q8IYU8 434 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 PHACTR4Q8IZ21 702 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 OR7G3Q8NG95 312 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 OR2L2Q8NH16 312 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 NEIL2Q969S2 332 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 GFM2Q969S9 779 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 PRPF18Q99633 342 aaKnown RBP19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 UGT2B28Q9BY64 529 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 ZDHHC4Q9NPG8 344 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 ADGRE2Q9UHX3 823 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 CDH7Q9ULB5 785 aa19.07■□□□□ 0.64
PCDHB11-202ENST00000624887 KLHL33A6NCF5 533 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CLOCKO15516 846 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 KAT7O95251 611 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CLPTM1O96005 669 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CDKN2CP42773 168 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PNLIPRP1P54315 467 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 TBPL1P62380 186 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CHRNB3Q05901 458 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 ACSM2AQ08AH3 577 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 ACSM2BQ68CK6 577 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CWF19L1Q69YN2 538 aaKnown RBP19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 OR4F3Q6IEY1 312 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 TRMT11Q7Z4G4 463 aaKnown RBP19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 SYTL1Q8IYJ3 562 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 OR9A1PQ8NGU1 263 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 HM13Q8TCT9 377 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 HIC2Q96JB3 615 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 TBCDQ9BTW9 1192 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PADI4Q9UM07 663 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 C5orf42Q9H799 3197 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 MGAT4DA6NG13 374 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 ENO4A6NNW6 628 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 MAGEB17A8MXT2 336 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 CXCR6O00574 342 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 RFXANKO14593 260 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PRSS23O95084 383 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PGM3O95394 542 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 B3GALT4O96024 378 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 TFAP2AP05549 437 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 EIF2DP41214 584 aaKnown RBP19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 RPL5P46777 297 aaKnown RBP19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 UGT8Q16880 541 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PIP5KL1Q5T9C9 394 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM46CQ5VWP2 391 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 EGFLAMQ63HQ2 1017 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 GALNT15Q8N3T1 639 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 AURKBQ96GD4 344 aaPredicted RBP19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 COX14Q96I36 57 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 SGPP1Q9BX95 441 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 IGFLR1Q9H665 355 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 ITM2CQ9NQX7 267 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 PNPLA3Q9NST1 481 aa19.06■□□□□ 0.64
PCDHB11-202ENST00000624887 EI24O14681 340 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 DEAF1O75398 565 aaPredicted RBP19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 MYO1DO94832 1006 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 GSNP06396 782 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 NPPBP16860 134 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 ACADLP28330 430 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 TRPC1P48995 793 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 MERTKQ12866 999 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 APOFQ13790 326 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 NFE2L1Q14494 772 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 COL13A1Q5TAT6 717 aaPredicted RBP19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 KRT80Q6KB66 452 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 CRTC3Q6UUV7 619 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 ADAMTSL4Q6UY14 1074 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 C11orf96Q7Z7L8 435 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 PLA2G15Q8NCC3 412 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 OR8J2Q8NGG1 315 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 HUS1BQ8NHY5 278 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 NELL1Q92832 810 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM120BQ96EK7 910 aaKnown RBP19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 CHFRQ96EP1 664 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 WDR34Q96EX3 536 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms