RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 YJEFN3A6XGL0 299 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 NR5A2O00482 541 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 HS6ST1O60243 411 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 FAM20BO75063 409 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 APOL3O95236 402 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PGK1P00558 417 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC35E2BP0CK96 405 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DARSP14868 501 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 NOS2P35228 1153 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ADRA1BP35368 520 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 LIPAP38571 399 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 MTHFRP42898 656 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 BAG6P46379 1132 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DCDC1P59894 354 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ERVK-8P63133 956 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CSNK2BP67870 215 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DAB2P98082 770 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CYP4F8P98187 520 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CHRNB3Q05901 458 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 USP10Q14694 798 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TATDN3Q17R31 274 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 MICAQ29983 383 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF792Q3KQV3 632 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GPR33Q49SQ1 333 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PAN2Q504Q3 1202 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CAPN13Q6MZZ7 669 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ANKRD54Q6NXT1 300 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PLET1Q6UQ28 207 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CLEC20AQ6ZU45 233 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 JAZF1Q86VZ6 243 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ZC3HC1Q86WB0 502 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 KRT73Q86Y46 540 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC41A1Q8IVJ1 513 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CENPLQ8N0S6 344 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF540Q8NDQ6 660 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 OR9I1Q8NGQ6 314 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 OR5K1Q8NHB7 308 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 KIAA1143Q96AT1 154 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SIPA1Q96FS4 1042 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TRMT61AQ96FX7 289 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TBATAQ96M53 351 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SEPHS2Q99611 448 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TBCDQ9BTW9 1192 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DUSP16Q9BY84 665 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ULBP1Q9BZM6 244 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ELOVL6Q9H5J4 265 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 BRD9Q9H8M2 597 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TRIM45Q9H8W5 580 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 EML4Q9HC35 981 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 POLE3Q9NRF9 147 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ACTR10Q9NZ32 417 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ADAM30Q9UKF2 790 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 UBQLN1Q9UMX0 589 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 RNF215Q9Y6U7 377 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PLXNB2O15031 1838 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ASB14A6NK59 587 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 WASHC1A8K0Z3 465 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 WASH4PA8MWX3 477 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TARM1B6A8C7 271 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 SNAI1O95863 264 aaPredicted RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 LCKP06239 509 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 FABP1P07148 127 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 MMP3P08254 477 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 ACSM4P0C7M7 580 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 HLA-EP13747 358 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 SELLP14151 372 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 SMPD1P17405 629 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 HOXB6P17509 224 aaKnown RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 FSHRP23945 695 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 HRH2P25021 359 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 FMO3P31513 532 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TNFSF8P32971 234 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 GJA5P36382 358 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 GDI2P50395 445 aaKnown RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TKTL1P51854 596 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 KPNA2P52292 529 aaKnown RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TPI1P60174 286 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 LIPEQ05469 1076 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 RAPSNQ13702 412 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 EXOSC2Q13868 293 aaKnown RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF79Q15937 498 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 BAK1Q16611 211 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TIMM50Q3ZCQ8 353 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 PDSS1Q5T2R2 415 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 ARHGAP36Q6ZRI8 547 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TRILQ7L0X0 811 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 LUZP2Q86TE4 346 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 RNF130Q86XS8 419 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 SPATA2LQ8IUW3 424 aaPredicted RBP7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 CEP97Q8IW35 865 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 TRIM48Q8IWZ4 208 aa7.29□□□□□ -1.24
TRIM49B-202ENST00000622138 CHPFQ8IZ52 775 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms