RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PRLHRP49683 370 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ISL1P61371 349 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 TEAD2Q15562 447 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CTU2Q2VPK5 515 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 LDLRAP1Q5SW96 308 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 C6orf141Q5SZD1 244 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 GTF2IRD2BQ6EKJ0 949 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 DOK6Q6PKX4 331 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 SPESP1Q6UW49 350 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CHST15Q7LFX5 561 aaPredicted RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 R3HCC1LQ7Z5L2 792 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 RBM23Q86U06 439 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 GTF2IRD2Q86UP8 949 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 THOC6Q86W42 341 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 SLC22A15Q8IZD6 547 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 KLHL23Q8NBE8 558 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ZNF555Q8NEP9 628 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ZNF566Q969W8 418 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CCDC138Q96M89 665 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 PHF12Q96QT6 1004 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 RIOK2Q9BVS4 552 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 REXO4Q9GZR2 422 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 ATG10Q9H0Y0 220 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 IL1RAPQ9NPH3 570 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 TBC1D14Q9P2M4 693 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ERVK-11Q9UQG0 969 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 SLC5A10A0PJK1 596 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 E7EQ34 232 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 GNGT2O14610 69 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 NPC1O15118 1278 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 HTR1AP08908 422 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 IRF8Q02556 426 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 VMACQ2NL98 169 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 ZNF805Q5CZA5 627 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 GPR107Q5VW38 600 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 ERICH5Q6P6B1 374 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 DCP2Q8IU60 420 aaKnown RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 RAVER1Q8IY67 606 aaKnown RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 ZZZ3Q8IYH5 903 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 RASGEF1AQ8N9B8 481 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 OR56A3Q8NH54 315 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 STARD8Q92502 1023 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 OTUB2Q96DC9 234 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 OR4K3Q96R72 315 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 SPATA9Q9BWV2 254 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 LINC00597Q9H2U6 94 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 AASDHPPTQ9NRN7 309 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 STOX2Q9P2F5 926 aaPredicted RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 FBXO10Q9UK96 956 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 RUVBL1Q9Y265 456 aaKnown RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 HEMK1Q9Y5R4 338 aaPredicted RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 LOC100130705A0A1B0GUX0 176 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TRIM43BA6NCK2 446 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TTC34A8MYJ7 566 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 EVPLLA8MZ36 301 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 CLIC1O00299 241 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TSPAN6O43657 245 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 DPM1O60762 260 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 LRATO95237 230 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 CA8P35219 290 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 MMP12P39900 470 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 VAC14Q08AM6 782 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TOP3AQ13472 1001 aaPredicted RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 DOC2AQ14183 400 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 NEDD8Q15843 81 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 XKR6Q5GH73 641 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 LY6G5CQ5SRR4 150 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 ANKRD34AQ69YU3 496 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TMEM26Q6ZUK4 368 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 PTOV1Q86YD1 416 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 SYT12Q8IV01 421 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 SPARTQ8N0X7 666 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 RNF175Q8N4F7 328 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 ARL10Q8N8L6 244 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 FBXO15Q8NCQ5 510 aaPredicted RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 OR7A2PQ8NGA2 310 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 GLYATL1Q969I3 302 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TRIM43Q96BQ3 446 aaPredicted RBP9.13□□□□□ -0.95
PDPN-212ENST00000621990 EBPLQ9BY08 206 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 CHST8Q9H2A9 424 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 EPHX3Q9H6B9 360 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 TM9SF3Q9HD45 589 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 LTB4R2Q9NPC1 389 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 VNN3Q9NY84 501 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 IL36AQ9UHA7 158 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 AP1M2Q9Y6Q5 423 aa9.13□□□□□ -0.95
PDPN-212ENST00000621990 OR2AG2A6NM03 316 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 M0QX08 132 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 FPGTO14772 594 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ATG13O75143 517 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 DNAJB5O75953 348 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 IL7RP16871 459 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 SYN1P17600 705 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 POLR2EP19388 210 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 MATN1P21941 496 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 RAE1P78406 368 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 CD47Q08722 323 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms