RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ZNF318Q5VUA4 2279 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 RSF1Q96T23 1441 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 C2orf81A6NN90 581 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TMEM110-MUSTN1A8MSY1 372 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 KPNA7A9QM74 516 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 GLRA3O75311 464 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 SRSF10O75494 262 aaKnown RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 B3GALNT1O75752 331 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 HSPA4LO95757 839 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 P4HA1P13674 534 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 MPZP25189 248 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TNNT2P45379 298 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 STAT2P52630 851 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 HUNKP57058 714 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 CSNK2BP67870 215 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 CHAF1BQ13112 559 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 CALCOCO2Q13137 446 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TMED1Q13445 227 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 SLC30A6Q6NXT4 461 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 ARHGAP22Q7Z5H3 698 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 NUDT13Q86X67 352 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 RPAP2Q8IXW5 612 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 MCUQ8NE86 351 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 OR13C3Q8NGS6 347 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 MGARPQ8TDB4 240 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 ANP32BQ92688 251 aaKnown RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 JAKMIP2Q96AA8 810 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 NSUN4Q96CB9 384 aaKnown RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TSGA13Q96PP4 275 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 SLF1Q9BQI6 1058 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 GPATCH1Q9BRR8 931 aaKnown RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 PI4K2AQ9BTU6 479 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 MIS12Q9H081 205 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 OPA3Q9H6K4 179 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 CCDC177Q9NQR7 707 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-229ENST00000621897 GTF3C4Q9UKN8 822 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 SMC3Q9UQE7 1217 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TMED3Q9Y3Q3 217 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 TRIM17Q9Y577 477 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 ABCA7Q8IZY2 2146 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 PASKQ96RG2 1323 aa3.65□□□□□ -1.83
BRCA1-229ENST00000621897 MYH14Q7Z406 1995 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 IDH3BO43837 385 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CDK2AP2O75956 126 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 DANCRP0C864 163 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 HAPLN1P10915 354 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 RPS2P15880 293 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CAPN2P17655 700 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 LHCGRP22888 699 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SSR1P43307 286 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 TNNT3P45378 269 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 LBX1P52954 281 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CSE1LP55060 971 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 HSD17B7P56937 341 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 EPS8Q12929 822 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SLMAPQ14BN4 828 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 WTAPQ15007 396 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 TAF7Q15545 349 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 UGT3A2Q3SY77 523 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 PDLIM3Q53GG5 364 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 HSP90B2PQ58FF3 399 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 RPUSD3Q6P087 351 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CNSTQ6PJW8 725 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 MMD2Q8IY49 270 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 Q8N377 158 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 Q8NBF4 154 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 OR10S1Q8NGN2 331 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SPATA18Q8TC71 538 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 PIGBQ92521 554 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SYN2Q92777 582 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SPACA9Q96E40 222 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CALML4Q96GE6 196 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 JAKMIP1Q96N16 626 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 FOXN4Q96NZ1 517 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 TEX12Q9BXU0 123 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 WNT5BQ9H1J7 359 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 C2orf40Q9H1Z8 148 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 SLC7A10Q9NS82 523 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 DPP3Q9NY33 737 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 CPSF2Q9P2I0 782 aaKnown RBP3.64□□□□□ -1.83
BRCA1-229ENST00000621897 AGTPBP1Q9UPW5 1226 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 PADI2Q9Y2J8 665 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 ABCC9O60706 1549 aa3.64□□□□□ -1.83
BRCA1-229ENST00000621897 ATAD2BQ9ULI0 1458 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 LOC100509620A0A075B734 347 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 IGHV3OR16-10A0A075B7F0 116 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 MPTX1A8MV57 137 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 A8MV72 311 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 TBCAO75347 108 aaKnown RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 STARD3NLO95772 234 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 MT-ND3P03897 115 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 VTNP04004 478 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 ADRB2P07550 413 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 SCG2P13521 617 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 PORP16435 677 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 IL11P20809 199 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 PRKACGP22612 351 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 RBMS1P29558 406 aaKnown RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 ATP5DP30049 168 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms