RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RBBP7Q16576 425 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SLC5A12Q1EHB4 618 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ZNF658BQ4V348 819 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 SEL1L2Q5TEA6 688 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 FBXW10Q5XX13 1052 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KIRREL2Q6UWL6 708 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ISLR2Q6UXK2 745 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 LINC00696Q6ZRV3 163 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OVCH1Q7RTY7 1134 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PIGWQ7Z7B1 504 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 TBC1D21Q8IYX1 336 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 DNAJC22Q8N4W6 341 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OTUD6BQ8N6M0 293 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OR5K2Q8NHB8 316 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 CENPHQ9H3R5 247 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SOX17Q9H6I2 414 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 SLC22A11Q9NSA0 550 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 EURLQ9NYK6 297 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 WHRNQ9P202 907 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 NXT1Q9UKK6 140 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 HS3ST3B1Q9Y662 390 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PDZD2O15018 2839 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PSTPIP1O43586 416 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SNRPB2P08579 225 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 GSTM1P09488 218 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PSMB4P28070 264 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 RBL1P28749 1068 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KCNJ1P48048 391 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 GSTM4Q03013 218 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KLF1Q13351 362 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 ART3Q13508 389 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SLMAPQ14BN4 828 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 NKG7Q16617 165 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 TAZQ16635 292 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SYTL3Q4VX76 610 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ICE2Q659A1 982 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 TRMT10CQ7L0Y3 403 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 CROCCP2Q86T23 111 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SERPINA9Q86WD7 417 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 FAM20CQ8IXL6 584 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 CATSPER1Q8NEC5 780 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OR11G2Q8NGC1 345 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 OR1N1Q8NGS0 311 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 FLVCR1-AS1Q8TAF5 88 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 CCT6BQ92526 530 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 ELMO1Q92556 727 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 DNAJC1Q96KC8 554 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 SPSB2Q99619 263 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 C19orf43Q9BQ61 176 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 GORASP1Q9BQQ3 440 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 REPIN1Q9BWE0 567 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 C10orf88Q9H8K7 445 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 CHST11Q9NPF2 352 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SEMA3GQ9NS98 782 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 SUCOQ9UBS9 1254 aaKnown RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 CTSFQ9UBX1 484 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 PLAGL1Q9UM63 463 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KLHL20Q9Y2M5 609 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 KLF2Q9Y5W3 355 aaPredicted RBP7.5□□□□□ -1.21
CLK1-215ENST00000621181 CAPN7Q9Y6W3 813 aa7.5□□□□□ -1.21
CLK1-215ENST00000621181 hCG_1818297A0A087WSY0 165 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 TRGV8A0A0C4DH27 118 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 QSOX1O00391 747 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 KRT38O76015 456 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 STK10O94804 968 aaKnown RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 AP2A2O94973 939 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 FTH1P02794 183 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 CHN1P15882 459 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 ADRA1AP35348 466 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 PTGER4P35408 488 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 IFFO1Q0D2I5 559 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 MFAP5Q13361 173 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 PTK6Q13882 451 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 VWA2Q5GFL6 755 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 RPUSD3Q6P087 351 aaKnown RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 TMEM207Q6UWW9 146 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 GFRALQ6UXV0 394 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 SYDE1Q6ZW31 735 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 MCATQ8IVS2 390 aaKnown RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 CCDC110Q8TBZ0 833 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 RELTQ969Z4 430 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 CHMP6Q96FZ7 201 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 LMF1Q96S06 567 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 TBL1YQ9BQ87 522 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 CRB3Q9BUF7 120 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 ROPN1BQ9BZX4 212 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 SLC26A1Q9H2B4 701 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 ROPN1Q9HAT0 212 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 CUTCQ9NTM9 273 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 MTRF1LQ9UGC7 380 aaKnown RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 ITGB1BP2Q9UKP3 347 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLK1-215ENST00000621181 MAU2Q9Y6X3 613 aa7.49□□□□□ -1.21
CLK1-215ENST00000621181 SETD2Q9BYW2 2564 aaPredicted RBP7.49□□□□□ -1.21
CLK1-215ENST00000621181 TRBV5-4A0A0C4DH59 114 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 APOC4-APOC2K7ER74 178 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms