RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PRDX1Q06830 199 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 NAA25Q14CX7 972 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 PRTGQ2VWP7 1150 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 PRR30Q53SZ7 412 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 SPANXN3Q5MJ09 141 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 RBM20Q5T481 1227 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 JMJD6Q6NYC1 403 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 UBE2R2Q712K3 238 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 PCGF5Q86SE9 256 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 GALNT16Q8N428 558 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 CLEC1AQ8NC01 280 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 MESP1Q9BRJ9 268 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 TRIM51Q9BSJ1 452 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 ZNF304Q9HCX3 659 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 CUEDC1Q9NWM3 386 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 ANKMY1Q9P2S6 941 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 CDC23Q9UJX2 597 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 FBXL4Q9UKA2 621 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 ADAMTS6Q9UKP5 1117 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 VSTM2BA6NLU5 285 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 AGPSO00116 658 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 SOCS6O14544 535 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 ZBTB14O43829 449 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 TTC4O95801 387 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 IGHEP01854 428 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 ELK3P41970 407 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CARSP49589 748 aaKnown RBP16.37■□□□□ 0.21
HMGN3-203ENST00000620514 PGGT1BP53609 377 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CDKN2DP55273 166 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 MYBPC3Q14896 1274 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 HKDC1Q2TB90 917 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 SLC6A19Q695T7 634 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 PLD3Q8IV08 490 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 PRSS58Q8IYP2 241 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 Q8NA96 180 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CPT1CQ8TCG5 803 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 EEF1AKMT1Q8WVE0 214 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 COL26A1Q96A83 441 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CERS2Q96G23 380 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CFAP36Q96G28 342 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CABS1Q96KC9 395 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 OR2A5Q96R48 311 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 ZNF552Q9H707 407 aaPredicted RBP16.37■□□□□ 0.21
HMGN3-203ENST00000620514 CHMP2BQ9UQN3 213 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 RUVBL1Q9Y265 456 aaKnown RBP16.37■□□□□ 0.21
HMGN3-203ENST00000620514 HS3ST3B1Q9Y662 390 aa16.37■□□□□ 0.21
HMGN3-203ENST00000620514 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 HEATR5BQ9P2D3 2071 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 FLNCQ14315 2725 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 RELNP78509 3460 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 EIF3FO00303 357 aaPredicted RBP16.36■□□□□ 0.21
HMGN3-203ENST00000620514 FFAR3O14843 346 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 HAT1O14929 419 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 FANCGO15287 622 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 GPR42O15529 346 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 ABCB7O75027 752 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 CCNDBP1O95273 360 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 AHSGP02765 367 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 UQCRFS1P47985 274 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 DR1Q01658 176 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 SRSF1Q07955 248 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGN3-203ENST00000620514 MUM1Q2TAK8 710 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 THEMIS2Q5TEJ8 643 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 TRMT10BQ6PF06 316 aaKnown RBP16.36■□□□□ 0.21
HMGN3-203ENST00000620514 PAQR3Q6TCH7 311 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 KIRREL2Q6UWL6 708 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 MBOAT1Q6ZNC8 495 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 ADCK2Q7Z695 626 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 ATCAYQ86WG3 371 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 CNTN4Q8IWV2 1026 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 CSNK1A1LQ8N752 337 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 STT3BQ8TCJ2 826 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 PDLIM2Q96JY6 352 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 NAPGQ99747 312 aaPredicted RBP16.36■□□□□ 0.21
HMGN3-203ENST00000620514 ATP13A2Q9NQ11 1180 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 PDE10AQ9Y233 779 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 MAP4K5Q9Y4K4 846 aa16.36■□□□□ 0.21
HMGN3-203ENST00000620514 H7BY64 318 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 P2RX6O15547 441 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 TTI1O43156 1089 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 STATHP02808 62 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 ITGA8P53708 1063 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 SNRPNP63162 240 aaKnown RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 ABATP80404 500 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 KLC1Q07866 573 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 UBAP2LQ14157 1087 aaKnown RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 MORF4L2Q15014 288 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 RBBP7Q16576 425 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 TEDDM1Q5T9Z0 273 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 UGT3A1Q6NUS8 523 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 HIBCHQ6NVY1 386 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 PRMT9Q6P2P2 845 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 HPS6Q86YV9 775 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 EFCAB3Q8N7B9 438 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 PRAP1Q96NZ9 151 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 NAT9Q9BTE0 207 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms