RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	DLL4	Q9NR61	685 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	INIP	Q9NRY2	104 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SIRT5	Q9NXA8	310 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	NINJ2	Q9NZG7	142 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	LRIT1	Q9P2V4	623 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SPO11	Q9Y5K1	396 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	N6AMT1	Q9Y5N5	214 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	COLEC10	Q9Y6Z7	277 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SHANK1	Q9Y566	2161 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CREB3	O43889	395 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SPAG6	O75602	509 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	MATN4	O95460	622 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	MLYCD	O95822	493 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	VIM	P08670	466 aa	Known RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	ENO2	P09104	434 aa	Predicted RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	IMPDH2	P12268	514 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	KDELR1	P24390	212 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	UGT1A3	P35503	534 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	ETV5	P41161	510 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	MAGEA8	P43361	318 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	PLTP	P55058	493 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CYP4F2	P78329	520 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLBP	Q14493	270 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	TEX44	Q53QW1	395 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	KRTCAP3	Q53RY4	240 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	MARC1	Q5VT66	337 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CPZ	Q66K79	652 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CGB2	Q6NT52	195 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	TMPRSS9	Q7Z410	1059 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	LINC00523	Q86TU6	105 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	ZDHHC13	Q8IUH4	622 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	ZNF547	Q8IVP9	402 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CACNA2D3	Q8IZS8	1091 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	KCT2	Q8NC54	265 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	STYX	Q8WUJ0	223 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	UBLCP1	Q8WVY7	318 aa	Predicted RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	P3H4	Q92791	437 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	CFAP57	Q96MR6	1250 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	GBP5	Q96PP8	586 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	LGMN	Q99538	433 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	WDR77	Q9BQA1	342 aa	Predicted RBP	5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC7A5P2	Q9GIP4	190 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	GLOD4	Q9HC38	313 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	LHX9	Q9NQ69	397 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	PFDN4	Q9NQP4	134 aa		5.21	□□□□□ -1.58
CBWD3-215	ENST00000619322	MYOCOS	A0A1B0GUC4	107 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	MKRN2OS	H3BPM6	223 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	GOLGA8M	H3BSY2	632 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	DNALI1	O14645	258 aa	Predicted RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SPOP	O43791	374 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ENTPD5	O75356	428 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	USP1	O94782	785 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	UBXN7	O94888	489 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	UBOX5	O94941	541 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	IL18BP	O95998	194 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	FUCA1	P04066	466 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	FES	P07332	822 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	RCVRN	P35243	200 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	KCNJ1	P48048	391 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ITGA8	P53708	1063 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	MPP2	Q14168	576 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	TMTC4	Q5T4D3	741 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	FAXC	Q5TGI0	409 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ATG9B	Q674R7	924 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	DENND2C	Q68D51	928 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	TXNRD3NB	Q6F5E7	133 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SPOCD1	Q6ZMY3	1216 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SH2D5	Q6ZV89	423 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SIAH3	Q8IW03	269 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ANKS4B	Q8N8V4	417 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	LMNTD1	Q8N9Z9	388 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	OR2Y1	Q8NGV0	311 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	CEP70	Q8NHQ1	597 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PCDH19	Q8TAB3	1148 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	CCHCR1	Q8TD31	782 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ATG4A	Q8WYN0	398 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PDXP	Q96GD0	296 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	NAF1	Q96HR8	494 aa	Known RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	OSBPL8	Q9BZF1	889 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PCBD2	Q9H0N5	130 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	MIR1-1HG	Q9H1L0	117 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	GSX1	Q9H4S2	264 aa	Predicted RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	INTS10	Q9NVR2	710 aa	Known RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC5A6	Q9Y289	635 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	FADS2P1	A8MWK0	482 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	KRT5	P13647	590 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	CHN1	P15882	459 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	IL1R2	P27930	398 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	FDFT1	P37268	417 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC26A3	P40879	764 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PXN	P49023	591 aa	Predicted RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	DNAJC3	Q13217	504 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ZNF630	Q2M218	657 aa	Predicted RBP	5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PRAMEF13	Q5VWM6	474 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	PAOX	Q6QHF9	649 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	GK5	Q6ZS86	529 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	CAMKMT	Q7Z624	323 aa		5.2	□□□□□ -1.58
CBWD3-215	ENST00000619322	ZC3H18	Q86VM9	953 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms